Detailed information NTG0626759

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LNP04_RS11895
• Genome accession: NZ_CP087131
• Coordinates: 2579279..2580388 (-)
• Length: 369 a.a.
• NCBI ID: WP_229983182.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. C-71
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2574279..2585388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LNP04_RS11865 (LNP04_11865)	-	2574292..2574672 (-)	381	WP_229983177.1	group III truncated hemoglobin	-
LNP04_RS11870 (LNP04_11870)	-	2574842..2575813 (+)	972	WP_229983178.1	ion channel	-
LNP04_RS11875 (LNP04_11875)	-	2575813..2576301 (+)	489	WP_229983179.1	YkgJ family cysteine cluster protein	-
LNP04_RS11880 (LNP04_11880)	-	2576409..2576984 (+)	576	WP_229983180.1	hypothetical protein	-
LNP04_RS11885 (LNP04_11885)	-	2577229..2577597 (-)	369	WP_229983181.1	iron chaperone	-
LNP04_RS11890 (LNP04_11890)	gdhA	2577729..2579087 (-)	1359	WP_129535367.1	NADP-specific glutamate dehydrogenase	-
LNP04_RS11895 (LNP04_11895)	dprA	2579279..2580388 (-)	1110	WP_229983182.1	DNA-processing protein DprA	Machinery gene
LNP04_RS11900 (LNP04_11900)	-	2580428..2581195 (-)	768	WP_229983183.1	rhomboid family intramembrane serine protease	-
LNP04_RS11905 (LNP04_11905)	-	2581413..2582345 (+)	933	WP_229983184.1	DUF3078 domain-containing protein	-
LNP04_RS11910 (LNP04_11910)	sufD	2582418..2583725 (-)	1308	WP_229986300.1	Fe-S cluster assembly protein SufD	-
LNP04_RS11915 (LNP04_11915)	sufC	2583840..2584583 (-)	744	WP_047443242.1	Fe-S cluster assembly ATPase SufC	-
LNP04_RS11920 (LNP04_11920)	-	2584681..2585061 (-)	381	WP_229983185.1	GxxExxY protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41334.28 Da
• Isoelectric Point: 6.8816

>NTDB_id=626759 LNP04_RS11895 WP_229983182.1 2579279..2580388(-) (dprA) [Chryseobacterium sp. C-71]
MYSEEHLYSIALRECNFIGDINFFKLVRSFGSAKKVWESTKKELSKTDGIGTKTVSDIGNPEHLKFAEKELLFCEKNSIK
INLRHQDELPFLLKECDDAPAILYQKGNFDINLKPISLVGTRNISAYGKKFIEDFFEEVKSHQFISISGLALGVDKEVHE
QSLKHQIPTIGVLAHGFHTLYPSKNKKLSEKIIEENGGLLSEFNSSRKPDRENFIQRNRIVAGISPSTIVVETAFGGGSI
STATFANTYNRDVFALPGKITDKYSQGCNHLIFQNKATAISTIKDLLDLIGFNDPKEKIEELFPRSEISVQLSESQELIY
QNIAANPHVSLDDLAEKISVASHKILPVILELELLGKVKSFSGRQFLAI

Nucleotide

• Length: 1110 bp

>NTDB_id=626759 LNP04_RS11895 WP_229983182.1 2579279..2580388(-) (dprA) [Chryseobacterium sp. C-71]
ATGTATTCTGAAGAACATCTCTACTCTATTGCTCTCCGTGAGTGTAATTTTATAGGTGACATCAATTTTTTCAAACTTGT
TCGAAGTTTCGGAAGCGCAAAAAAAGTTTGGGAATCAACTAAAAAAGAACTCAGCAAAACCGACGGAATCGGTACAAAAA
CAGTTTCTGACATTGGAAATCCTGAGCATTTAAAATTTGCAGAAAAAGAGCTTTTGTTTTGCGAAAAAAATTCCATAAAA
ATCAATTTAAGACATCAAGATGAGCTTCCTTTTTTGCTCAAAGAATGCGATGATGCACCTGCAATTCTCTACCAGAAAGG
AAATTTTGATATCAATTTAAAACCCATAAGCTTAGTCGGGACAAGAAATATTTCAGCTTACGGTAAAAAATTCATTGAAG
ATTTTTTTGAAGAGGTTAAATCACATCAATTTATCTCCATTAGCGGCTTGGCTTTAGGTGTAGACAAAGAAGTACATGAG
CAATCTTTAAAACATCAAATTCCTACGATTGGAGTTTTGGCGCATGGTTTTCACACTTTATATCCTTCAAAAAATAAAAA
ACTTTCAGAAAAAATCATTGAAGAAAACGGTGGATTGCTTTCAGAATTTAATTCATCAAGAAAGCCGGATCGGGAAAATT
TTATTCAAAGAAACAGAATTGTTGCCGGAATTTCTCCATCTACGATTGTGGTAGAAACAGCTTTCGGAGGTGGCTCCATC
AGCACTGCAACATTTGCCAACACCTACAATAGGGATGTTTTTGCTTTACCCGGAAAGATTACTGACAAATACAGCCAAGG
CTGTAACCATCTTATTTTTCAGAATAAAGCGACAGCCATTTCTACGATCAAAGACTTACTCGATTTGATTGGTTTTAATG
ACCCGAAAGAGAAAATTGAAGAACTTTTTCCACGCAGTGAGATTTCAGTTCAATTATCTGAAAGTCAAGAATTAATATAT
CAAAATATTGCAGCAAATCCACACGTTTCTCTGGATGATTTAGCAGAAAAAATTTCAGTGGCTTCACACAAAATACTGCC
AGTGATATTAGAATTGGAGCTTTTGGGAAAAGTAAAATCATTTTCCGGGAGACAATTTTTAGCAATATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.495	98.645	0.547