Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BAPNAU_RS13710 Genome accession   NC_022530
Coordinates   2840399..2840590 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis NAU-B3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2835399..2845590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAPNAU_RS13685 (BAPNAU_2659) - 2835758..2836744 (-) 987 WP_022553561.1 ABC transporter ATP-binding protein -
  BAPNAU_RS13690 (BAPNAU_2660) - 2836918..2837703 (-) 786 WP_022553562.1 DUF2268 domain-containing protein -
  BAPNAU_RS13695 (BAPNAU_2661) fabF 2837786..2839024 (-) 1239 WP_022553563.1 beta-ketoacyl-ACP synthase II -
  BAPNAU_RS13700 (BAPNAU_2662) - 2839047..2839985 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BAPNAU_RS13705 (BAPNAU_2663) - 2840152..2840370 (+) 219 WP_007409123.1 hypothetical protein -
  BAPNAU_RS13710 (BAPNAU_2664) comZ 2840399..2840590 (-) 192 WP_003155061.1 ComZ family protein Regulator
  BAPNAU_RS13715 (BAPNAU_2665) med 2840603..2841556 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  BAPNAU_RS13720 (BAPNAU_2666) - 2841647..2842213 (-) 567 WP_032863798.1 hypothetical protein -
  BAPNAU_RS13725 (BAPNAU_2667) - 2842296..2843030 (-) 735 WP_022553564.1 hypothetical protein -
  BAPNAU_RS13730 (BAPNAU_2668) - 2843291..2843476 (+) 186 WP_007409129.1 YjzD family protein -
  BAPNAU_RS13735 (BAPNAU_2669) - 2843514..2843693 (-) 180 WP_003155070.1 YjzC family protein -
  BAPNAU_RS13740 (BAPNAU_2670) argF 2843769..2844740 (-) 972 WP_022553565.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=62675 BAPNAU_RS13710 WP_003155061.1 2840399..2840590(-) (comZ) [Bacillus velezensis NAU-B3]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=62675 BAPNAU_RS13710 WP_003155061.1 2840399..2840590(-) (comZ) [Bacillus velezensis NAU-B3]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment