Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BAPNAU_RS12375 Genome accession   NC_022530
Coordinates   2586578..2587042 (+) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis NAU-B3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2581578..2592042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAPNAU_RS12350 (BAPNAU_2373) - 2582076..2582633 (-) 558 WP_022553416.1 hypothetical protein -
  BAPNAU_RS12355 (BAPNAU_2374) fadH 2582747..2583511 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BAPNAU_RS12360 (BAPNAU_2375) - 2583655..2584518 (+) 864 WP_022553417.1 metallophosphoesterase -
  BAPNAU_RS12365 (BAPNAU_2376) - 2584593..2585087 (+) 495 WP_089072484.1 L,D-transpeptidase family protein -
  BAPNAU_RS12370 (BAPNAU_2377) - 2585163..2586455 (+) 1293 WP_014417606.1 MFS transporter -
  BAPNAU_RS12375 (BAPNAU_2378) kre 2586578..2587042 (+) 465 WP_014417605.1 YkyB family protein Regulator
  BAPNAU_RS12380 (BAPNAU_2379) cheV 2587085..2587996 (-) 912 WP_014417604.1 chemotaxis protein CheV -
  BAPNAU_RS21660 (BAPNAU_2380) - 2588185..2588346 (+) 162 WP_007409608.1 hypothetical protein -
  BAPNAU_RS12385 (BAPNAU_2381) - 2588547..2589716 (+) 1170 WP_007611083.1 aminotransferase A -
  BAPNAU_RS12390 (BAPNAU_2382) - 2589741..2591561 (-) 1821 WP_021493759.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=62668 BAPNAU_RS12375 WP_014417605.1 2586578..2587042(+) (kre) [Bacillus velezensis NAU-B3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=62668 BAPNAU_RS12375 WP_014417605.1 2586578..2587042(+) (kre) [Bacillus velezensis NAU-B3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment