Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BAPNAU_RS06955 Genome accession   NC_022530
Coordinates   1381953..1382753 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis NAU-B3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376953..1387753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAPNAU_RS06935 (BAPNAU_1323) - 1377076..1377921 (+) 846 WP_021494303.1 TlyA family RNA methyltransferase -
  BAPNAU_RS06940 (BAPNAU_1324) argR 1378018..1378467 (+) 450 WP_003153173.1 transcriptional regulator ArgR -
  BAPNAU_RS06945 (BAPNAU_1325) recN 1378499..1380229 (+) 1731 WP_007408359.1 DNA repair protein RecN Machinery gene
  BAPNAU_RS06950 (BAPNAU_1327) spoIVB 1380393..1381672 (+) 1280 Protein_1331 SpoIVB peptidase -
  BAPNAU_RS06955 (BAPNAU_1328) spo0A 1381953..1382753 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  BAPNAU_RS06960 (BAPNAU_1329) alr 1382901..1384082 (-) 1182 WP_021494302.1 alanine racemase -
  BAPNAU_RS06965 (BAPNAU_1330) - 1384257..1384469 (-) 213 WP_014418351.1 spore germination protein -
  BAPNAU_RS06970 (BAPNAU_1331) - 1384595..1384807 (-) 213 WP_029973891.1 spore germination protein -
  BAPNAU_RS06975 (BAPNAU_1332) - 1384934..1386052 (-) 1119 WP_038461838.1 NADH-dependent flavin oxidoreductase -
  BAPNAU_RS21610 - 1386146..1386283 (-) 138 WP_014470646.1 hypothetical protein -
  BAPNAU_RS06985 (BAPNAU_1334) - 1386574..1387206 (-) 633 WP_014418348.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=62659 BAPNAU_RS06955 WP_003153177.1 1381953..1382753(+) (spo0A) [Bacillus velezensis NAU-B3]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=62659 BAPNAU_RS06955 WP_003153177.1 1381953..1382753(+) (spo0A) [Bacillus velezensis NAU-B3]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCTGATGTACTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment