Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   N2A93_RS06475 Genome accession   NZ_CP104046
Coordinates   1261432..1261914 (-) Length   160 a.a.
NCBI ID   WP_003107135.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP14     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1256432..1266914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A93_RS06455 (N2A93_06455) budA 1256479..1257198 (-) 720 WP_003107129.1 acetolactate decarboxylase -
  N2A93_RS06460 (N2A93_06460) alsS 1257211..1258887 (-) 1677 WP_003107132.1 acetolactate synthase AlsS -
  N2A93_RS06465 (N2A93_06465) - 1259008..1260240 (-) 1233 WP_003107133.1 tetratricopeptide repeat protein -
  N2A93_RS06470 (N2A93_06470) - 1260230..1261411 (-) 1182 WP_003107134.1 AI-2E family transporter -
  N2A93_RS06475 (N2A93_06475) mutX 1261432..1261914 (-) 483 WP_003107135.1 8-oxo-dGTP diphosphatase Machinery gene
  N2A93_RS06480 (N2A93_06480) - 1262166..1263176 (+) 1011 WP_003104420.1 lactonase family protein -
  N2A93_RS06485 (N2A93_06485) - 1263239..1263430 (+) 192 WP_003107138.1 hypothetical protein -
  N2A93_RS06490 (N2A93_06490) rfbB 1263460..1264506 (-) 1047 WP_003107140.1 dTDP-glucose 4,6-dehydratase -
  N2A93_RS06495 (N2A93_06495) - 1264528..1265121 (-) 594 WP_003107142.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  N2A93_RS06500 (N2A93_06500) rfbA 1265121..1265990 (-) 870 WP_003104922.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18881.21 Da        Isoelectric Point: 4.2760

>NTDB_id=626531 N2A93_RS06475 WP_003107135.1 1261432..1261914(-) (mutX) [Streptococcus parauberis strain KSP14]
MMQLATICYIDNGDSLLLLHRNKKENDIHEGKWISVGGKLESGESPDECAIREIFEETHLTVKEMDFKGVITFPEFTPAL
DWYTYVFKVTDFEGQLISDEESREGTLEWVPYDEVLKKPTWEGDYEIFKWILEDRPFFSAKFTYDKSNQLIDQSVHFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=626531 N2A93_RS06475 WP_003107135.1 1261432..1261914(-) (mutX) [Streptococcus parauberis strain KSP14]
ATGATGCAATTAGCAACAATTTGTTATATTGATAATGGAGACTCATTATTACTATTACACCGAAATAAAAAAGAGAATGA
TATTCATGAAGGGAAATGGATTTCTGTGGGTGGTAAACTTGAATCTGGCGAGAGTCCTGATGAATGTGCTATTCGTGAGA
TATTTGAAGAAACACATCTAACTGTTAAAGAGATGGACTTTAAGGGTGTGATTACTTTTCCTGAATTTACACCTGCTCTT
GATTGGTATACTTACGTTTTTAAAGTGACGGACTTTGAAGGACAATTGATTTCAGACGAAGAATCTCGAGAAGGAACTTT
AGAATGGGTTCCTTATGATGAAGTCTTAAAGAAACCGACTTGGGAAGGTGATTATGAAATCTTCAAATGGATTTTAGAAG
ATCGTCCATTCTTTTCAGCTAAATTTACTTATGATAAATCAAATCAATTAATTGATCAATCTGTACACTTCTATGAAAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706