Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   N2A93_RS05455 Genome accession   NZ_CP104046
Coordinates   1053056..1053721 (-) Length   221 a.a.
NCBI ID   WP_003106900.1    Uniprot ID   -
Organism   Streptococcus parauberis strain KSP14     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1048056..1058721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A93_RS05425 (N2A93_05425) xerS 1048161..1049231 (+) 1071 WP_003106892.1 tyrosine recombinase XerS Machinery gene
  N2A93_RS05430 (N2A93_05430) - 1049304..1050110 (-) 807 WP_003106893.1 hypothetical protein -
  N2A93_RS05435 (N2A93_05435) - 1050189..1050809 (-) 621 WP_003106895.1 hypothetical protein -
  N2A93_RS05440 (N2A93_05440) - 1050809..1051144 (-) 336 WP_003103364.1 MazG nucleotide pyrophosphohydrolase domain-containing protein -
  N2A93_RS05445 (N2A93_05445) - 1051383..1051961 (-) 579 WP_003106896.1 NUDIX domain-containing protein -
  N2A93_RS05450 (N2A93_05450) - 1052112..1053059 (-) 948 WP_003106899.1 sensor histidine kinase -
  N2A93_RS05455 (N2A93_05455) braR 1053056..1053721 (-) 666 WP_003106900.1 response regulator transcription factor Regulator
  N2A93_RS05460 (N2A93_05460) - 1053764..1055719 (-) 1956 WP_003106901.1 ABC transporter permease -
  N2A93_RS05465 (N2A93_05465) - 1055721..1056473 (-) 753 WP_003105207.1 ABC transporter ATP-binding protein -
  N2A93_RS05470 (N2A93_05470) - 1056650..1057132 (+) 483 WP_003106110.1 PASTA domain-containing protein -
  N2A93_RS05475 (N2A93_05475) trmFO 1057157..1058491 (-) 1335 WP_003106904.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25426.34 Da        Isoelectric Point: 5.0945

>NTDB_id=626524 N2A93_RS05455 WP_003106900.1 1053056..1053721(-) (braR) [Streptococcus parauberis strain KSP14]
MKIHQKIFIIEDDSTIKNMLTQHLSQNYLVASVLNFRDIKREVTDFAPDLILMDITLPYYNGFYWTTEIRKELTVPIIFI
SSSSDEMDAVMALNMGGDDFISKPFSLTILDAKISAFLRRAQQFTKSDLTFQDFTLMFDGNLVKGEEQIALSPTEHKILA
MLFSKQGQVVTKEEILTNLWENDQFIDQNTLNVNMTRLRKRVGELGMDNIHTVRGVGYVLK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=626524 N2A93_RS05455 WP_003106900.1 1053056..1053721(-) (braR) [Streptococcus parauberis strain KSP14]
ATGAAAATACATCAAAAAATTTTTATCATTGAGGATGACTCGACAATAAAGAATATGCTAACGCAACATTTATCCCAAAA
TTATCTAGTAGCAAGCGTCCTAAATTTTAGAGATATTAAACGTGAAGTCACAGACTTTGCCCCAGACTTAATCTTGATGG
ATATTACTCTTCCCTATTATAATGGATTTTATTGGACAACTGAAATCAGAAAAGAGCTGACAGTTCCAATAATTTTTATA
TCTAGCTCCTCAGATGAAATGGATGCTGTAATGGCTCTAAATATGGGTGGAGATGATTTTATCAGTAAACCCTTTTCACT
AACTATTTTAGATGCAAAAATTTCTGCCTTCTTAAGAAGAGCGCAACAATTTACCAAATCAGACTTGACCTTTCAAGATT
TCACCCTCATGTTTGATGGCAATTTGGTTAAGGGTGAGGAACAAATTGCCTTGTCTCCGACAGAACACAAAATTTTAGCT
ATGCTATTCTCAAAGCAAGGACAAGTAGTAACCAAGGAAGAAATTTTGACTAACTTATGGGAGAATGATCAGTTCATTGA
TCAAAACACCTTGAATGTCAATATGACCAGACTTCGCAAGCGCGTCGGTGAGCTTGGGATGGATAACATTCATACGGTGA
GAGGAGTAGGTTACGTACTGAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.789

98.643

0.462