Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MRX62_RS01355 Genome accession   NZ_CP104027
Coordinates   229061..229477 (-) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   B2I4N3
Organism   Xylella fastidiosa subsp. pauca strain 50088     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 224061..234477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MRX62_RS01345 (MRX62_01330) - 226432..228474 (-) 2043 WP_031336549.1 methyl-accepting chemotaxis protein -
  MRX62_RS01350 (MRX62_01335) - 228514..229044 (-) 531 WP_004085458.1 chemotaxis protein CheW -
  MRX62_RS01355 (MRX62_01340) pilG 229061..229477 (-) 417 WP_004085459.1 PleD family two-component system response regulator Regulator
  MRX62_RS01360 (MRX62_01345) gshB 229733..230677 (+) 945 WP_010894415.1 glutathione synthase -
  MRX62_RS01365 (MRX62_01350) - 230679..231554 (+) 876 WP_031337767.1 energy transducer TonB -
  MRX62_RS01370 (MRX62_01355) - 231863..232672 (+) 810 WP_031337766.1 DUF6216 family protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=626416 MRX62_RS01355 WP_004085459.1 229061..229477(-) (pilG) [Xylella fastidiosa subsp. pauca strain 50088]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=626416 MRX62_RS01355 WP_004085459.1 229061..229477(-) (pilG) [Xylella fastidiosa subsp. pauca strain 50088]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATCGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCTCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B2I4N3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652