Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | MRX62_RS01130 | Genome accession | NZ_CP104027 |
| Coordinates | 180918..182111 (-) | Length | 397 a.a. |
| NCBI ID | WP_010894376.1 | Uniprot ID | Q9PC71 |
| Organism | Xylella fastidiosa subsp. pauca strain 50088 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 175918..187111
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MRX62_RS01100 (MRX62_01080) | ruvA | 176697..177281 (-) | 585 | WP_010894370.1 | Holliday junction branch migration protein RuvA | - |
| MRX62_RS01105 (MRX62_01085) | ruvC | 177367..177888 (-) | 522 | WP_010894371.1 | crossover junction endodeoxyribonuclease RuvC | - |
| MRX62_RS01110 (MRX62_01090) | - | 178008..178742 (-) | 735 | WP_010894372.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| MRX62_RS01115 (MRX62_01095) | - | 178874..179449 (-) | 576 | WP_228762862.1 | DUF2726 domain-containing protein | - |
| MRX62_RS01120 (MRX62_01100) | - | 179462..179734 (-) | 273 | WP_031337777.1 | oxidative damage protection protein | - |
| MRX62_RS01125 (MRX62_01105) | mutY | 179769..180818 (-) | 1050 | WP_031337775.1 | A/G-specific adenine glycosylase | - |
| MRX62_RS01130 (MRX62_01110) | pilA | 180918..182111 (-) | 1194 | WP_010894376.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| MRX62_RS01135 (MRX62_01115) | - | 182679..183152 (+) | 474 | WP_010894377.1 | LEA type 2 family protein | - |
| MRX62_RS01140 (MRX62_01120) | - | 183414..184028 (+) | 615 | WP_023906492.1 | HNH endonuclease | - |
| MRX62_RS01145 (MRX62_01125) | - | 184160..184966 (-) | 807 | WP_010894379.1 | TatD family hydrolase | - |
| MRX62_RS01150 (MRX62_01130) | - | 185216..186712 (+) | 1497 | WP_010894380.1 | anthranilate synthase component I family protein | - |
Sequence
Protein
Download Length: 397 a.a. Molecular weight: 42747.80 Da Isoelectric Point: 6.7732
>NTDB_id=626414 MRX62_RS01130 WP_010894376.1 180918..182111(-) (pilA) [Xylella fastidiosa subsp. pauca strain 50088]
MLSFLRRKKPTNAISDNEWSKYSAEEMAAAFPKAPSLDEAPDQEQTSTTPLLSSADQPALLTHSTSSASTELAISTGDDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNALVDGLRKRMKAREFADIQ
TLLAALRNELIAILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSTEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGLVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
MLSFLRRKKPTNAISDNEWSKYSAEEMAAAFPKAPSLDEAPDQEQTSTTPLLSSADQPALLTHSTSSASTELAISTGDDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNALVDGLRKRMKAREFADIQ
TLLAALRNELIAILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSTEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGLVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
Nucleotide
Download Length: 1194 bp
>NTDB_id=626414 MRX62_RS01130 WP_010894376.1 180918..182111(-) (pilA) [Xylella fastidiosa subsp. pauca strain 50088]
ATGTTAAGCTTTCTACGCCGCAAGAAGCCCACCAATGCCATCAGCGACAACGAGTGGAGCAAATACAGCGCTGAAGAGAT
GGCGGCTGCCTTTCCAAAAGCTCCTTCGCTGGATGAGGCTCCAGACCAAGAGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTCTACAGAGCTAGCAATCTCCACTGGAGACGACACA
TCGGGGGCGAGTACCCCAACAGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCACGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCATTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCCCTAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCGCGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACCACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGCATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCACCGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAGATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGCACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTCTTGTGGTAACCAAGCTCGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA
ATGTTAAGCTTTCTACGCCGCAAGAAGCCCACCAATGCCATCAGCGACAACGAGTGGAGCAAATACAGCGCTGAAGAGAT
GGCGGCTGCCTTTCCAAAAGCTCCTTCGCTGGATGAGGCTCCAGACCAAGAGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTCTACAGAGCTAGCAATCTCCACTGGAGACGACACA
TCGGGGGCGAGTACCCCAACAGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCACGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCATTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCCCTAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCGCGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACCACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGCATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCACCGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAGATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGCACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTCTTGTGGTAACCAAGCTCGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
46.006 |
78.841 |
0.363 |