Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   BAPNAU_RS01780 Genome accession   NC_022530
Coordinates   336684..337082 (-) Length   132 a.a.
NCBI ID   WP_022552569.1    Uniprot ID   -
Organism   Bacillus velezensis NAU-B3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 331684..342082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAPNAU_RS01755 (BAPNAU_0298) - 331856..333058 (+) 1203 WP_014416870.1 GTP-binding protein -
  BAPNAU_RS01760 (BAPNAU_0299) - 333123..334259 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  BAPNAU_RS01765 - 334274..334708 (+) 435 Protein_303 RDD family protein -
  BAPNAU_RS01770 (BAPNAU_0302) - 334780..335103 (+) 324 WP_007409357.1 YckD family protein -
  BAPNAU_RS01775 (BAPNAU_0303) - 335207..336643 (+) 1437 WP_022552568.1 family 1 glycosylhydrolase -
  BAPNAU_RS01780 (BAPNAU_0304) nin/comJ 336684..337082 (-) 399 WP_022552569.1 competence protein ComJ Regulator
  BAPNAU_RS01785 (BAPNAU_0305) nucA/comI 337103..337540 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BAPNAU_RS01790 (BAPNAU_0306) hxlB 337871..338428 (-) 558 WP_014416874.1 6-phospho-3-hexuloisomerase -
  BAPNAU_RS01795 (BAPNAU_0307) hxlA 338425..339060 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  BAPNAU_RS01800 (BAPNAU_0308) - 339292..339654 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14897.88 Da        Isoelectric Point: 4.7846

>NTDB_id=62631 BAPNAU_RS01780 WP_022552569.1 336684..337082(-) (nin/comJ) [Bacillus velezensis NAU-B3]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVTSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=62631 BAPNAU_RS01780 WP_022552569.1 336684..337082(-) (nin/comJ) [Bacillus velezensis NAU-B3]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTAACATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment