Detailed information NTG0626188

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LOD77_RS02770
• Genome accession: NZ_CP086728
• Coordinates: 532114..533163 (+)
• Length: 349 a.a.
• NCBI ID: WP_171988893.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SS20
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 527114..538163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOD77_RS02735 (LOD77_02725)	-	527845..528939 (+)	1095	WP_274505678.1	histidine kinase	-
LOD77_RS02740 (LOD77_02730)	-	528936..529535 (+)	600	WP_274505679.1	response regulator transcription factor	-
LOD77_RS02745 (LOD77_02735)	-	529653..529874 (+)	222	WP_024396172.1	YqgQ family protein	-
LOD77_RS02750 (LOD77_02740)	-	529871..530257 (+)	387	WP_130554731.1	rhodanese-like domain-containing protein	-
LOD77_RS02755 (LOD77_02745)	-	530293..531024 (+)	732	WP_274505680.1	hypothetical protein	-
LOD77_RS02760 (LOD77_02750)	rsmD	531110..531649 (+)	540	WP_171988895.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LOD77_RS02765 (LOD77_02755)	coaD	531639..532127 (+)	489	WP_171988894.1	pantetheine-phosphate adenylyltransferase	-
LOD77_RS02770 (LOD77_02760)	sepM	532114..533163 (+)	1050	WP_171988893.1	SepM family pheromone-processing serine protease	Regulator
LOD77_RS02775 (LOD77_02765)	-	533447..534100 (+)	654	WP_274505681.1	YutD family protein	-
LOD77_RS02780 (LOD77_02770)	rlmN	534109..535221 (+)	1113	WP_171988891.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
LOD77_RS02785 (LOD77_02775)	-	535218..535730 (+)	513	WP_171988890.1	VanZ family protein	-
LOD77_RS02790 (LOD77_02780)	nadE	536169..536993 (-)	825	WP_171988889.1	ammonia-dependent NAD(+) synthetase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37862.66 Da
• Isoelectric Point: 4.1352

>NTDB_id=626188 LOD77_RS02770 WP_171988893.1 532114..533163(+) (sepM) [Streptococcus parasuis strain SS20]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDEEPGSYNFTYVSVLQATALQLLIAQFNP
YADIVSAEEMTGGADSEEYYRIAQFYMETSQNMAKYQGLTLADRDVEMDFFGVYVLDLAEDSTFKNVLNIADTVVSINGQ
TFESSQGLIKYVSGLELDSDVTVGYVSDGEEKTADGKIIKLSNGKNGIGITLVDHTEVKSSVPIDFQTGGIGGPSAGMMF
TLAIYTQLAEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKNPTAKTNYEEAKEA
AEKANADIKIVPVTTVQEAIDYLKSTKSE

Nucleotide

• Length: 1050 bp

>NTDB_id=626188 LOD77_RS02770 WP_171988893.1 532114..533163(+) (sepM) [Streptococcus parasuis strain SS20]
ATGAAGAAAAATAAGAAATGGCTATTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTTTTTGTACG
TCTACCATATTATATTGAGAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATGAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCC
TACGCAGATATTGTTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGGATAGCTCAATTTTATAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGACTAACCTTGGCTGACAGGGATGTGGAGATGGATTTCTTTGGGGTAT
ATGTGTTGGATTTAGCAGAAGACTCTACTTTTAAAAATGTTTTGAATATCGCTGATACGGTTGTTAGTATAAATGGTCAA
ACGTTTGAATCTTCTCAGGGACTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGATGGAGAAGAAAAGACTGCCGACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGGATTGGTATCACGCTAGTAG
ACCATACTGAGGTAAAAAGTTCTGTCCCAATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTATGATGTTT
ACATTAGCTATTTATACACAGCTGGCAGAGCCAGACTTGCGTGATGGTCGTGTTATTGCAGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATCGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAAAAGAATCCAACAGCTAAGACAAACTATGAAGAGGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTAAAATCGTACCAGTGACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	60.983	99.14	0.605