Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BN867_RS05470 | Genome accession | NC_022529 |
| Coordinates | 1048850..1049152 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni 4031 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1043850..1054152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BN867_RS05445 (BN867_10640) | rpsR | 1044213..1044473 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BN867_RS05450 (BN867_10650) | lon | 1044533..1046908 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| BN867_RS05455 (BN867_10660) | - | 1046925..1047572 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| BN867_RS05460 (BN867_10670) | fliW | 1047733..1048122 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BN867_RS05465 (BN867_10680) | proC | 1048122..1048853 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BN867_RS05470 (BN867_10690) | ctsT | 1048850..1049152 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| BN867_RS05475 (BN867_10700) | - | 1049149..1049811 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BN867_RS05480 (BN867_10710) | - | 1049808..1050260 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BN867_RS05485 (BN867_10720) | hemD | 1050257..1050886 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| BN867_RS05490 (BN867_10730) | thiE | 1050864..1051496 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| BN867_RS05495 (BN867_10740) | thiD | 1051486..1052298 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BN867_RS05500 (BN867_10750) | - | 1052295..1052981 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| BN867_RS05505 (BN867_10760) | - | 1052978..1053739 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=62608 BN867_RS05470 WP_002853046.1 1048850..1049152(+) (ctsT) [Campylobacter jejuni 4031]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=62608 BN867_RS05470 WP_002853046.1 1048850..1049152(+) (ctsT) [Campylobacter jejuni 4031]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |