Detailed information NTG0062580

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: VIBNI_RS13410
• Genome accession: NC_022528
• Coordinates: 2994115..2997501 (+)
• Length: 1128 a.a.
• NCBI ID: WP_022602209.1
• Uniprot ID: -
• Organism: Vibrio nigripulchritudo
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2989115..3002501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VIBNI_RS13390 (VIBNI_A2816)	erpA	2989612..2989953 (-)	342	WP_004401935.1	iron-sulfur cluster insertion protein ErpA	-
VIBNI_RS13395 (VIBNI_A2817)	hemL	2990153..2991442 (+)	1290	WP_022551474.1	glutamate-1-semialdehyde 2,1-aminomutase	-
VIBNI_RS13400 (VIBNI_A2818)	-	2991681..2992766 (+)	1086	WP_004401933.1	AI-2E family transporter	-
VIBNI_RS13405 (VIBNI_A2819)	rsmC	2992846..2993874 (+)	1029	WP_022551475.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
VIBNI_RS13410 (VIBNI_A2820)	chiS	2994115..2997501 (+)	3387	WP_022602209.1	ATP-binding protein	Regulator
VIBNI_RS13415 (VIBNI_A2822)	-	2998248..2999927 (+)	1680	WP_022551477.1	ABC transporter substrate-binding protein	-
VIBNI_RS13420 (VIBNI_A2823)	-	3000083..3001069 (+)	987	WP_004401928.1	ABC transporter permease	-
VIBNI_RS13425 (VIBNI_A2824)	-	3001072..3002097 (+)	1026	WP_004401926.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126939.46 Da
• Isoelectric Point: 5.5694

>NTDB_id=62580 VIBNI_RS13410 WP_022602209.1 2994115..2997501(+) (chiS) [Vibrio nigripulchritudo]
MFKSNKKQKFKRLQHTLMVAFLVLSITPLTLIALFFLQSHSKDLQEQSTSHLLSVRDTKKQQLVDYFDAKESEVMGFVRS
ELAYNSGGRFYGLINAFSNLGETIEQSREYAQQRYIEGSGDQIKTSILPESDDYQGSERYRLMHKRYHRRYVDLLKRSDF
DDILLVDLDGNVVYSLNKHDNYGTNLGSGKYRDSNLGETFQAIKSLVKKQKDTPDITPIVMSDFALEGSEHIAWFAAPII
QQEYLHSYALFRLPSTKLISLFEDTAARKAIKAFLVGSDKQARVFNVTQEEIDKSSEIIDRALNGQTSVRTFINTAGESI
IAAYTSIKIQNIEWALIAERTEAEAFARIQQLEKVFVVAMLIAIILVVICSHYLSNFITSPLLKLTWSAERVSAGDLDEV
MFETRRKDEIGRLAVSFQRMQRSIREKILTIKSQNEELEAHLKVIQSQNDELQLANKLKDEFLATTSHELRTPLHGMVGI
AEALISGANGPIPANQKHQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIQAAAVNLSSSTRLVLELSQHLLGNKSIRII
NQVPMDLPLVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVLDDKLRVQVVDTGQGIPAEQLEHIFEPLIQAGQDSSR
YRQGAGLGLSISRQLIELMGGTLYVSSQPLVGTTFSFSLPLASDAEISTSKQLGEQNHFQLPEANENSSPEDNSLPENPE
GPLIVVADDEPVNLQILDSFLRMEGYRVKTAKDGTETLELVQQEKPELLLLDVMMPGLSGYQVCEQVRLSYDLSELPVIM
LTALSQTNDRIKGFDSGANDYLTKPFNKLELASRIKAHLSASKAELRRIENDKLQAELKQRALVEANLLETQGRLLEQLE
SAPEAILCLRDDGRIRFANEAASKLFKRTQEQLKRSNGDEVIAPKYLNLSQEHFCGGIDVYIDDRREHLSADVLKLPEGS
DIQYMYIFNVGGGINATRINNLETAVEALSSYAFEGDKGKLQQLKELGGEFTRIADKVSGRGGDKTELMREILVDSMTTA
IDYWESETGQTKFSFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSIEFILDNCHTPGAQRDKLVSLRD
KLQKLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=62580 VIBNI_RS13410 WP_022602209.1 2994115..2997501(+) (chiS) [Vibrio nigripulchritudo]
ATGTTTAAATCTAATAAAAAACAAAAATTTAAACGTCTTCAGCATACTTTGATGGTGGCATTTCTTGTCCTCAGTATTAC
GCCGCTGACTTTAATTGCTCTCTTCTTTTTGCAGTCTCATAGTAAAGATTTGCAGGAGCAGAGCACTTCTCACCTTCTTT
CAGTTCGAGATACGAAAAAACAACAACTTGTCGATTATTTCGATGCAAAAGAATCCGAAGTAATGGGTTTTGTCCGTTCC
GAACTGGCTTATAACAGTGGTGGTCGTTTTTACGGCCTTATCAATGCTTTCAGCAACTTAGGCGAAACGATTGAGCAATC
GCGGGAGTATGCGCAGCAGCGTTACATTGAAGGATCTGGGGATCAGATAAAAACGTCAATTTTGCCTGAGTCTGATGATT
ACCAGGGCAGCGAACGTTATCGCTTAATGCACAAGCGTTACCATCGACGTTACGTTGATCTTTTAAAACGCAGTGATTTT
GACGACATCTTGCTGGTCGATCTGGATGGAAACGTCGTTTACTCACTCAACAAGCACGACAATTATGGTACGAATCTGGG
TTCTGGAAAGTATCGGGACAGCAACCTCGGTGAAACTTTTCAGGCAATAAAATCTCTGGTGAAAAAGCAGAAAGACACGC
CAGACATTACGCCAATTGTGATGTCGGATTTTGCACTAGAGGGCAGTGAGCACATCGCGTGGTTTGCCGCGCCTATCATC
CAACAAGAATACCTGCACAGTTATGCCCTATTCCGTTTGCCTAGCACCAAGCTGATTTCTCTGTTTGAAGATACTGCCGC
GCGTAAAGCCATCAAGGCATTCTTGGTTGGTAGTGACAAACAGGCTCGTGTTTTTAACGTCACTCAGGAAGAAATTGACA
AAAGTAGTGAGATCATTGACCGCGCCCTTAACGGGCAAACCTCAGTCAGAACCTTTATCAATACCGCAGGCGAAAGCATT
ATTGCGGCTTACACCAGCATTAAGATCCAGAATATTGAGTGGGCATTGATTGCGGAAAGAACCGAAGCTGAAGCGTTTGC
TCGGATTCAGCAGCTAGAAAAAGTATTCGTGGTGGCCATGTTGATCGCCATTATACTTGTAGTGATCTGCTCCCATTATC
TTTCTAACTTCATTACGTCCCCACTTTTAAAACTGACGTGGTCAGCAGAAAGGGTTTCAGCTGGTGATCTCGACGAAGTG
ATGTTTGAAACACGCCGCAAAGACGAAATTGGTCGTCTGGCGGTCAGTTTCCAGCGAATGCAGCGCTCTATCCGTGAGAA
GATCCTCACCATCAAATCGCAAAATGAAGAGCTAGAAGCCCATCTGAAAGTGATTCAAAGCCAGAATGACGAGCTTCAAC
TGGCCAACAAACTGAAAGATGAATTCCTTGCAACCACCTCCCACGAGCTCCGTACACCATTACATGGCATGGTGGGTATT
GCCGAGGCATTGATTAGCGGAGCTAATGGTCCCATACCTGCAAACCAGAAACATCAGCTCGATATCATCATTAATAGCGG
TCAGCGTCTTGCAACTCTGGTTGATGATCTTCTGGACTATCACAAAATGCGCTACGGCAGCCTCGATATTCAGGCTGCCG
CTGTTAACCTCTCGTCCTCTACACGCTTGGTACTGGAACTGTCGCAGCATTTACTGGGCAACAAATCGATCCGCATCATT
AATCAGGTTCCGATGGATTTGCCTTTAGTATCCGCTGATCCGCAGCGTTTAGAACAGGTTCTCTACAACCTGATAGGCAA
TGCTATTAAGTACACCTCTGAAGGTAAAATCGTCATTTCAGCTACAGTGCTGGACGATAAACTCCGGGTTCAGGTGGTTG
ATACAGGTCAGGGGATTCCGGCAGAGCAGCTGGAGCATATTTTTGAGCCTCTCATTCAGGCGGGTCAGGACTCCAGCCGT
TACCGTCAGGGGGCGGGATTAGGCTTATCTATCAGTCGACAGTTGATCGAACTGATGGGAGGAACACTCTATGTCAGCAG
TCAGCCTCTTGTTGGGACCACCTTTAGCTTCTCTTTACCGCTAGCGTCAGATGCAGAGATATCAACGTCGAAGCAGCTTG
GAGAACAGAATCATTTCCAGTTGCCAGAAGCAAATGAAAACTCATCACCAGAAGACAATTCATTGCCAGAAAACCCAGAA
GGTCCACTTATTGTGGTCGCGGACGATGAACCGGTGAACCTGCAAATTCTGGACAGCTTCCTGCGAATGGAAGGATACAG
GGTGAAAACGGCAAAAGATGGCACCGAGACTCTGGAACTGGTTCAGCAGGAAAAGCCTGAACTTCTACTATTAGACGTGA
TGATGCCAGGATTAAGTGGCTATCAGGTTTGTGAGCAGGTTCGTCTGAGTTATGACTTATCTGAGCTTCCGGTCATTATG
CTTACCGCGCTAAGCCAGACCAACGATCGAATCAAAGGGTTCGACAGCGGGGCAAATGACTATTTAACTAAGCCATTCAA
CAAGCTCGAGCTGGCTTCTCGAATCAAAGCTCATCTCTCAGCAAGTAAGGCGGAACTTCGTCGAATTGAAAACGACAAGC
TTCAGGCAGAGCTTAAGCAAAGAGCACTAGTAGAAGCAAACCTGCTGGAAACACAAGGTCGATTGCTAGAACAGCTTGAA
TCGGCACCTGAAGCCATTCTGTGCCTTAGAGACGATGGCAGAATACGGTTTGCAAACGAGGCGGCATCTAAGCTATTTAA
ACGAACTCAAGAGCAGCTCAAACGTTCAAACGGCGATGAAGTCATCGCACCGAAATACCTCAACCTATCTCAGGAACACT
TCTGCGGCGGAATTGACGTCTACATTGACGACAGGCGTGAACACCTTTCAGCGGATGTATTGAAGCTGCCAGAAGGCTCT
GACATCCAGTATATGTACATATTCAATGTAGGCGGAGGCATTAACGCAACCCGCATTAATAATCTGGAAACAGCAGTTGA
AGCCCTGTCCAGCTATGCGTTTGAAGGAGACAAAGGCAAACTGCAACAGCTTAAAGAACTGGGCGGCGAGTTTACGCGAA
TCGCAGATAAAGTGTCTGGTCGTGGTGGAGACAAGACAGAGCTCATGAGAGAGATTCTGGTTGATTCAATGACAACTGCG
ATTGACTACTGGGAATCGGAAACGGGGCAAACCAAATTCTCCTTCGCAGAACAGAGTGGCTTATGGCGCGTCTACCTTGA
TCGCAGCACGCTGCAAACTAGAACACTGGATAAATACCTTCGTGTTGAAACTCTACCAAAAACTCCACGCTGGCGGACTG
TATTGAACTCTATCGAGTTTATTCTGGATAACTGCCATACGCCTGGCGCACAGCGTGACAAACTGGTTAGCCTGCGGGAT
AAATTGCAAAAACTCCTTACCTCATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.656	100	0.717