Detailed information NTG0625158

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NYR92_RS08730
• Genome accession: NZ_CP103783
• Coordinates: 1669599..1670588 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1664599..1675588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR92_RS08715 (NYR92_08715)	acpP	1664796..1665029 (+)	234	WP_003154310.1	acyl carrier protein	-
NYR92_RS08720 (NYR92_08720)	rncS	1665169..1665918 (+)	750	WP_003232030.1	ribonuclease III	-
NYR92_RS08725 (NYR92_08725)	smc	1666019..1669579 (+)	3561	WP_003232028.1	chromosome segregation protein SMC	-
NYR92_RS08730 (NYR92_08730)	pilA	1669599..1670588 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
NYR92_RS08735 (NYR92_08735)	sivC	1670625..1671110 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
NYR92_RS08740 (NYR92_08740)	srpM	1671287..1671619 (+)	333	WP_003238590.1	putative DNA-binding protein	-
NYR92_RS08745 (NYR92_08745)	ffh	1671633..1672973 (+)	1341	WP_003232020.1	signal recognition particle protein	-
NYR92_RS08750 (NYR92_08750)	rpsP	1673079..1673351 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
NYR92_RS08755 (NYR92_08755)	khpA	1673351..1673596 (+)	246	WP_003232017.1	KH domain-containing protein	-
NYR92_RS08760 (NYR92_08760)	ylqD	1673718..1674104 (+)	387	WP_003232015.1	YlqD family protein	-
NYR92_RS08765 (NYR92_08765)	rimM	1674109..1674633 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
NYR92_RS08770 (NYR92_08770)	trmD	1674630..1675361 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=625158 NYR92_RS08730 WP_003232026.1 1669599..1670588(+) (pilA) [Bacillus subtilis subsp. subtilis str. 168]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=625158 NYR92_RS08730 WP_003232026.1 1669599..1670588(+) (pilA) [Bacillus subtilis subsp. subtilis str. 168]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTTGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401