Detailed information NTG0624591

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5T33_RS00935
• Genome accession: NZ_CP103739
• Coordinates: 186833..187858 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 3359
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 181833..192858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5T33_RS00905 (M5T33_00905)	zapB	181917..182162 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
M5T33_RS00910 (M5T33_00910)	rraA	182247..182732 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5T33_RS00915 (M5T33_00915)	menA	182825..183751 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5T33_RS00920 (M5T33_00920)	hslU	183818..185149 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M5T33_RS00925 (M5T33_00925)	hslV	185159..185689 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5T33_RS00930 (M5T33_00930)	ftsN	185782..186741 (-)	960	WP_000068828.1	cell division protein FtsN	-
M5T33_RS00935 (M5T33_00935)	cytR	186833..187858 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M5T33_RS00940 (M5T33_00940)	priA	188014..190212 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
M5T33_RS00945 (M5T33_00945)	rpmE	190415..190627 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
M5T33_RS00950 (M5T33_00950)	yiiX	190688..191296 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M5T33_RS00955 (M5T33_00955)	metJ	191480..191797 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=624591 M5T33_RS00935 WP_000644904.1 186833..187858(-) (cytR) [Escherichia coli strain 3359]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=624591 M5T33_RS00935 WP_000644904.1 186833..187858(-) (cytR) [Escherichia coli strain 3359]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628