Detailed information NTG0062433

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: YB51_RS00825
• Genome accession: NC_022516
• Coordinates: 130098..130532 (+)
• Length: 144 a.a.
• NCBI ID: WP_009909097.1
• Uniprot ID: -
• Organism: Streptococcus suis YB51
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 125098..135532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YB51_RS00790 (YB51_0640)	-	125840..126205 (+)	366	WP_002936568.1	DUF1033 family protein	-
YB51_RS00795 (YB51_0645)	-	126240..127190 (-)	951	WP_002936565.1	S66 peptidase family protein	-
YB51_RS00800 (YB51_0650)	comYA	127276..128226 (+)	951	WP_013730075.1	competence type IV pilus ATPase ComGA	Machinery gene
YB51_RS00805 (YB51_0655)	comYB	128138..129175 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
YB51_RS00810 (YB51_0660)	comYC	129177..129458 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
YB51_RS00815 (YB51_0665)	comGD	129439..129846 (+)	408	WP_009909093.1	competence type IV pilus minor pilin ComGD	-
YB51_RS00820 (YB51_0670)	comYE	129818..130111 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
YB51_RS00825 (YB51_0675)	comGF/cglF	130098..130532 (+)	435	WP_009909097.1	competence type IV pilus minor pilin ComGF	Machinery gene
YB51_RS00830 (YB51_0680)	comGG	130510..130920 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
YB51_RS00835 (YB51_0685)	comYH	130977..131930 (+)	954	WP_013730077.1	class I SAM-dependent methyltransferase	Machinery gene
YB51_RS00840 (YB51_0690)	-	131980..133167 (+)	1188	WP_013730078.1	acetate kinase	-
YB51_RS00845 (YB51_0695)	-	133482..134078 (+)	597	WP_009909104.1	folate family ECF transporter S component	-
YB51_RS00850 (YB51_0700)	-	134089..135345 (+)	1257	WP_013730079.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16449.77 Da
• Isoelectric Point: 5.9234

>NTDB_id=62433 YB51_RS00825 WP_009909097.1 130098..130532(+) (comGF/cglF) [Streptococcus suis YB51]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=62433 YB51_RS00825 WP_009909097.1 130098..130532(+) (comGF/cglF) [Streptococcus suis YB51]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458