Detailed information NTG0624328

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5T31_RS21495
• Genome accession: NZ_CP103694
• Coordinates: 4411123..4412148 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ST12468
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4406123..4417148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5T31_RS21475 (M5T31_21475)	metJ	4407184..4407501 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5T31_RS21480 (M5T31_21480)	yiiX	4407685..4408293 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M5T31_RS21485 (M5T31_21485)	rpmE	4408354..4408566 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5T31_RS21490 (M5T31_21490)	priA	4408769..4410967 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
M5T31_RS21495 (M5T31_21495)	cytR	4411123..4412148 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M5T31_RS21500 (M5T31_21500)	ftsN	4412240..4413199 (+)	960	WP_000068828.1	cell division protein FtsN	-
M5T31_RS21505 (M5T31_21505)	hslV	4413292..4413822 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5T31_RS21510 (M5T31_21510)	hslU	4413832..4415163 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M5T31_RS21515 (M5T31_21515)	menA	4415230..4416156 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5T31_RS21520 (M5T31_21520)	rraA	4416249..4416734 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5T31_RS21525 (M5T31_21525)	zapB	4416819..4417064 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=624328 M5T31_RS21495 WP_000644904.1 4411123..4412148(+) (cytR) [Escherichia coli strain ST12468]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=624328 M5T31_RS21495 WP_000644904.1 4411123..4412148(+) (cytR) [Escherichia coli strain ST12468]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628