Detailed information NTG0624166

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5S92_RS25475
• Genome accession: NZ_CP103672
• Coordinates: 5132621..5133646 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain 4433
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5127621..5138646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5S92_RS25455 (M5S92_25455)	metJ	5128806..5129123 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5S92_RS25460 (M5S92_25460)	yiiX	5129183..5129791 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M5S92_RS25465 (M5S92_25465)	rpmE	5129852..5130064 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5S92_RS25470 (M5S92_25470)	priA	5130267..5132465 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M5S92_RS25475 (M5S92_25475)	cytR	5132621..5133646 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M5S92_RS25480 (M5S92_25480)	ftsN	5133738..5134697 (+)	960	WP_000068834.1	cell division protein FtsN	-
M5S92_RS25485 (M5S92_25485)	hslV	5134790..5135320 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5S92_RS25490 (M5S92_25490)	hslU	5135330..5136661 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M5S92_RS25495 (M5S92_25495)	menA	5136728..5137654 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5S92_RS25500 (M5S92_25500)	rraA	5137747..5138232 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5S92_RS25505 (M5S92_25505)	zapB	5138317..5138562 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=624166 M5S92_RS25475 WP_000644908.1 5132621..5133646(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 4433]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=624166 M5S92_RS25475 WP_000644908.1 5132621..5133646(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 4433]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625