Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   LJY09_RS16220 Genome accession   NZ_CP086208
Coordinates   3179724..3180674 (-) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia sp. J2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3174724..3185674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJY09_RS16190 - 3174791..3175870 (+) 1080 WP_154973754.1 PrsW family intramembrane metalloprotease -
  LJY09_RS16195 - 3176339..3176479 (-) 141 WP_014459290.1 hypothetical protein -
  LJY09_RS16200 - 3176742..3177008 (-) 267 Protein_3139 manganese catalase family protein -
  LJY09_RS16205 - 3177052..3178008 (-) 957 WP_028414464.1 siderophore ABC transporter substrate-binding protein -
  LJY09_RS16210 - 3178032..3178790 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  LJY09_RS16215 - 3178784..3179731 (-) 948 WP_028414466.1 iron chelate uptake ABC transporter family permease subunit -
  LJY09_RS16220 ceuB 3179724..3180674 (-) 951 WP_028414467.1 ABC transporter permease Machinery gene
  LJY09_RS16225 - 3181238..3182044 (-) 807 WP_028414468.1 cell wall hydrolase -
  LJY09_RS16230 - 3182407..3182661 (+) 255 WP_013057893.1 hypothetical protein -
  LJY09_RS16235 - 3182743..3182907 (-) 165 WP_197028701.1 hypothetical protein -
  LJY09_RS16240 - 3183398..3183583 (-) 186 WP_014459286.1 hypothetical protein -
  LJY09_RS16245 - 3184139..3184702 (-) 564 WP_028414469.1 NAD(P)H-dependent oxidoreductase -
  LJY09_RS16250 lepB 3184995..3185555 (-) 561 WP_028414470.1 signal peptidase I -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=623717 LJY09_RS16220 WP_028414467.1 3179724..3180674(-) (ceuB) [Priestia sp. J2]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=623717 LJY09_RS16220 WP_028414467.1 3179724..3180674(-) (ceuB) [Priestia sp. J2]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTTGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497