Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LJY09_RS03545 Genome accession   NZ_CP086208
Coordinates   670780..670974 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia sp. J2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 665780..675974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJY09_RS03520 galT 665845..667368 (+) 1524 WP_033578040.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  LJY09_RS03525 - 667411..668295 (-) 885 WP_154973591.1 NAD(P)-dependent oxidoreductase -
  LJY09_RS03530 - 668499..668687 (-) 189 WP_028412377.1 YjzD family protein -
  LJY09_RS03535 - 668897..669637 (+) 741 WP_013055401.1 hypothetical protein -
  LJY09_RS03540 - 669819..670703 (+) 885 WP_033578042.1 NAD-dependent epimerase/dehydratase family protein -
  LJY09_RS03545 comZ 670780..670974 (+) 195 WP_013081746.1 ComZ family protein Regulator
  LJY09_RS03550 - 671003..671203 (-) 201 WP_028412375.1 hypothetical protein -
  LJY09_RS03555 - 671460..672398 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  LJY09_RS03560 fabF 672438..673679 (+) 1242 WP_033578043.1 beta-ketoacyl-ACP synthase II -
  LJY09_RS03565 - 673786..674559 (+) 774 WP_099330623.1 DUF2268 domain-containing protein -
  LJY09_RS03570 - 674786..675808 (+) 1023 WP_098113540.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=623701 LJY09_RS03545 WP_013081746.1 670780..670974(+) (comZ) [Priestia sp. J2]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=623701 LJY09_RS03545 WP_013081746.1 670780..670974(+) (comZ) [Priestia sp. J2]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATTTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTGACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563