Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LJX92_RS25140 Genome accession   NZ_CP086206
Coordinates   5625362..5625769 (-) Length   135 a.a.
NCBI ID   WP_005792254.1    Uniprot ID   A0A7S7MTU1
Organism   Pseudomonas sp. HN8-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5620362..5630769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJX92_RS25125 (LJX92_25155) - 5622365..5624416 (-) 2052 WP_228309076.1 methyl-accepting chemotaxis protein -
  LJX92_RS25130 (LJX92_25160) - 5624413..5624937 (-) 525 WP_228309077.1 chemotaxis protein CheW -
  LJX92_RS25135 (LJX92_25165) pilH 5624950..5625315 (-) 366 WP_003234583.1 twitching motility response regulator PilH -
  LJX92_RS25140 (LJX92_25170) pilG 5625362..5625769 (-) 408 WP_005792254.1 twitching motility response regulator PilG Regulator
  LJX92_RS25145 (LJX92_25175) gshB 5626009..5626962 (+) 954 WP_005792255.1 glutathione synthase -
  LJX92_RS25150 (LJX92_25180) - 5627040..5627945 (+) 906 WP_032878937.1 energy transducer TonB -
  LJX92_RS25155 (LJX92_25185) - 5627996..5628565 (+) 570 WP_005792257.1 YqgE/AlgH family protein -
  LJX92_RS25160 (LJX92_25190) ruvX 5628565..5629002 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  LJX92_RS25165 (LJX92_25195) pyrR 5629135..5629641 (+) 507 WP_005792260.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LJX92_RS25170 (LJX92_25200) - 5629666..5630670 (+) 1005 WP_032878936.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.53 Da        Isoelectric Point: 7.3845

>NTDB_id=623684 LJX92_RS25140 WP_005792254.1 5625362..5625769(-) (pilG) [Pseudomonas sp. HN8-3]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=623684 LJX92_RS25140 WP_005792254.1 5625362..5625769(-) (pilG) [Pseudomonas sp. HN8-3]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACACTGTT
GAAGAACATGGGGTGCGAGGTCATCACCGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTGATCATGTTGTCCTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S7MTU1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652