NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	LL975_RS01460	Genome accession	NZ_CP086198
Coordinates	276660..277613 (+)	Length	317 a.a.
NCBI ID	WP_164942889.1	Uniprot ID	A0A6G7ETT4
Organism	Macrococcoides canis strain KW0150
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 271660..282613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL975_RS01430 (LL975_01425)	-	271894..272250 (-)	357	WP_254254925.1	YojF family protein	-
LL975_RS01435 (LL975_01430)	thiD	272375..273205 (-)	831	WP_086043484.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
LL975_RS01440 (LL975_01435)	-	273301..273960 (+)	660	WP_086043483.1	uracil-DNA glycosylase	-
LL975_RS01445 (LL975_01440)	-	273957..274265 (+)	309	WP_086043482.1	DUF5327 family protein	-
LL975_RS01450 (LL975_01445)	-	274285..274647 (+)	363	WP_133420095.1	DUF423 domain-containing protein	-
LL975_RS01455 (LL975_01450)	-	275128..276480 (-)	1353	WP_254254924.1	APC family permease	-
LL975_RS01460 (LL975_01455)	ceuB	276660..277613 (+)	954	WP_164942889.1	ABC transporter permease	Machinery gene
LL975_RS01465 (LL975_01460)	-	277606..278559 (+)	954	WP_086043478.1	iron chelate uptake ABC transporter family permease subunit	-
LL975_RS01470 (LL975_01465)	-	278552..279358 (+)	807	WP_086043477.1	ABC transporter ATP-binding protein	-
LL975_RS01475 (LL975_01470)	-	279451..280491 (+)	1041	WP_236366033.1	ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD	-
LL975_RS01480 (LL975_01475)	-	280553..281080 (+)	528	WP_254254923.1	transposase	-
LL975_RS01485 (LL975_01480)	-	281092..281955 (+)	864	WP_254255399.1	IS3 family transposase	-

Sequence

Protein

Download Length: 317 a.a. Molecular weight: 34753.43 Da Isoelectric Point: 10.5554

                                >NTDB_id=623586 LL975_RS01460 WP_164942889.1 276660..277613(+) (ceuB) [Macrococcoides canis strain KW0150]

MKIIYTILLLLILSIISMFIGVVDLSPSNLLNLDENQKNILLNSRLPRTFAIILAGVALSVAGLLMQQLTRNKFVSPTTA

GTMDFAKFGVLIAMIFFAQAPLLIKLSFSIVSAIIGTMMFMWIVNRIKFKDAIFIPLVGLMLGNIVSSLATFMALRFNAV

QSISNFFVGDFSMITKGRYEVLFIIIPMVIVIYLFAHHFTIVGMGESFSKNLGISYAKIMNLGVIIAAIVSATVVVTIGV

LPFLGLIIPNIVGLFVGDHMNKALPYTALFGAILVMVADIFSRLIIFPYEIPIGLTLGIVGSVIFMAILLKRRKSYV

Nucleotide

Download Length: 954 bp

                                >NTDB_id=623586 LL975_RS01460 WP_164942889.1 276660..277613(+) (ceuB) [Macrococcoides canis strain KW0150]

ATGAAAATAATTTACACCATACTACTGTTGCTGATTTTGTCTATAATCTCTATGTTTATTGGTGTTGTAGATTTAAGCCC

ATCAAATTTACTTAATTTAGATGAGAATCAAAAGAATATTTTGTTGAACAGTCGACTGCCGAGGACGTTTGCTATTATAT

TAGCGGGTGTGGCATTAAGTGTAGCTGGTTTGTTAATGCAGCAGCTCACACGTAATAAATTTGTATCACCAACGACAGCA

GGTACGATGGATTTTGCGAAGTTTGGTGTATTGATTGCAATGATATTCTTTGCACAGGCACCATTACTTATTAAATTATC

GTTCAGTATTGTTTCAGCGATTATCGGTACGATGATGTTTATGTGGATTGTCAATCGCATTAAGTTTAAGGATGCAATCT

TTATTCCGCTTGTAGGGCTCATGCTCGGTAACATCGTTTCAAGTTTAGCGACGTTTATGGCACTGCGTTTTAATGCGGTG

CAAAGTATTTCTAACTTCTTTGTGGGAGATTTCTCGATGATAACGAAAGGGCGTTATGAAGTATTATTCATTATCATTCC

GATGGTTATCGTGATTTATCTCTTTGCACATCATTTTACAATCGTCGGAATGGGTGAATCTTTCAGTAAGAACTTAGGTA

TATCTTACGCAAAGATAATGAATCTCGGTGTTATTATTGCAGCGATTGTATCTGCAACAGTAGTGGTAACGATTGGGGTA

TTACCATTTTTAGGATTAATTATTCCGAATATTGTTGGATTGTTTGTCGGTGATCATATGAATAAAGCATTACCGTACAC

AGCACTATTTGGTGCAATTCTCGTCATGGTAGCAGATATTTTCAGTCGATTAATCATCTTCCCTTACGAGATTCCAATCG

GTCTCACGCTTGGTATCGTTGGAAGTGTTATCTTTATGGCGATTCTCCTGAAGAGGAGGAAGTCATATGTCTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A6G7ETT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	49.837	96.845	0.483

Detailed information NTG0623586