Detailed information NTG0623506

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5S53_RS23700
• Genome accession: NZ_CP103592
• Coordinates: 4839673..4840698 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain 4224
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4834673..4845698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5S53_RS23680 (M5S53_23680)	metJ	4835858..4836175 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5S53_RS23685 (M5S53_23685)	yiiX	4836235..4836843 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M5S53_RS23690 (M5S53_23690)	rpmE	4836904..4837116 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5S53_RS23695 (M5S53_23695)	priA	4837319..4839517 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M5S53_RS23700 (M5S53_23700)	cytR	4839673..4840698 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M5S53_RS23705 (M5S53_23705)	ftsN	4840790..4841749 (+)	960	WP_000068834.1	cell division protein FtsN	-
M5S53_RS23710 (M5S53_23710)	hslV	4841842..4842372 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5S53_RS23715 (M5S53_23715)	hslU	4842382..4843713 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M5S53_RS23720 (M5S53_23720)	menA	4843780..4844706 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5S53_RS23725 (M5S53_23725)	rraA	4844799..4845284 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5S53_RS23730 (M5S53_23730)	zapB	4845369..4845614 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=623506 M5S53_RS23700 WP_000644908.1 4839673..4840698(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 4224]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=623506 M5S53_RS23700 WP_000644908.1 4839673..4840698(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 4224]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625