Detailed information NTG0623334

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5S79_RS21685
• Genome accession: NZ_CP103570
• Coordinates: 4508666..4509691 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 3045
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4503666..4514691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5S79_RS21665 (M5S79_21665)	-	4504013..4504993 (+)	981	WP_000399648.1	IS110-like element IS621 family transposase	-
M5S79_RS21670 (M5S79_21670)	yiiX	4505228..4505836 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M5S79_RS21675 (M5S79_21675)	rpmE	4505897..4506109 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5S79_RS21680 (M5S79_21680)	priA	4506312..4508510 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
M5S79_RS21685 (M5S79_21685)	cytR	4508666..4509691 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M5S79_RS21690 (M5S79_21690)	ftsN	4509783..4510742 (+)	960	WP_000068828.1	cell division protein FtsN	-
M5S79_RS21695 (M5S79_21695)	hslV	4510835..4511365 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5S79_RS21700 (M5S79_21700)	hslU	4511375..4512706 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M5S79_RS21705 (M5S79_21705)	menA	4512773..4513699 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5S79_RS21710 (M5S79_21710)	rraA	4513792..4514277 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5S79_RS21715 (M5S79_21715)	zapB	4514362..4514607 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=623334 M5S79_RS21685 WP_000644904.1 4508666..4509691(+) (cytR) [Escherichia coli strain 3045]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=623334 M5S79_RS21685 WP_000644904.1 4508666..4509691(+) (cytR) [Escherichia coli strain 3045]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628