Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | LL146_RS05170 | Genome accession | NZ_CP086172 |
| Coordinates | 1010405..1010707 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 6-897-19 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1005405..1015707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL146_RS05145 (LL146_05145) | rpsR | 1005768..1006028 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| LL146_RS05150 (LL146_05150) | lon | 1006088..1008463 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| LL146_RS05155 (LL146_05155) | - | 1008480..1009127 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| LL146_RS05160 (LL146_05160) | fliW | 1009288..1009677 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| LL146_RS05165 (LL146_05165) | proC | 1009677..1010408 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| LL146_RS05170 (LL146_05170) | ctsT | 1010405..1010707 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| LL146_RS05175 (LL146_05175) | - | 1010704..1011366 (+) | 663 | WP_002936695.1 | hypothetical protein | - |
| LL146_RS05180 (LL146_05180) | - | 1011363..1011815 (+) | 453 | WP_180819926.1 | hypothetical protein | - |
| LL146_RS05185 (LL146_05185) | hemD | 1011812..1012441 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| LL146_RS05190 (LL146_05190) | thiE | 1012419..1013051 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| LL146_RS05195 (LL146_05195) | thiD | 1013041..1013853 (-) | 813 | WP_002853647.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LL146_RS05200 (LL146_05200) | - | 1013850..1014536 (-) | 687 | WP_002853783.1 | endonuclease III domain-containing protein | - |
| LL146_RS05205 (LL146_05205) | - | 1014533..1015293 (-) | 761 | Protein_1011 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=623266 LL146_RS05170 WP_002853046.1 1010405..1010707(+) (ctsT) [Campylobacter jejuni strain 6-897-19]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=623266 LL146_RS05170 WP_002853046.1 1010405..1010707(+) (ctsT) [Campylobacter jejuni strain 6-897-19]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |