Detailed information NTG0623252

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5R24_RS24360
• Genome accession: NZ_CP103562
• Coordinates: 4957675..4958700 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain 751
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4952675..4963700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5R24_RS24340 (M5R24_24340)	metJ	4953860..4954177 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5R24_RS24345 (M5R24_24345)	yiiX	4954237..4954845 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M5R24_RS24350 (M5R24_24350)	rpmE	4954906..4955118 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5R24_RS24355 (M5R24_24355)	priA	4955321..4957519 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M5R24_RS24360 (M5R24_24360)	cytR	4957675..4958700 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M5R24_RS24365 (M5R24_24365)	ftsN	4958792..4959751 (+)	960	WP_000068834.1	cell division protein FtsN	-
M5R24_RS24370 (M5R24_24370)	hslV	4959844..4960374 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5R24_RS24375 (M5R24_24375)	hslU	4960384..4961715 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M5R24_RS24380 (M5R24_24380)	menA	4961782..4962708 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5R24_RS24385 (M5R24_24385)	rraA	4962801..4963286 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5R24_RS24390 (M5R24_24390)	zapB	4963371..4963616 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=623252 M5R24_RS24360 WP_000644908.1 4957675..4958700(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 751]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=623252 M5R24_RS24360 WP_000644908.1 4957675..4958700(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 751]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625