Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | LL145_RS05180 | Genome accession | NZ_CP086170 |
| Coordinates | 1016469..1016771 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 6-1197-19 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1011469..1021771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL145_RS05155 (LL145_05155) | rpsR | 1011832..1012092 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| LL145_RS05160 (LL145_05160) | lon | 1012152..1014527 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| LL145_RS05165 (LL145_05165) | - | 1014544..1015191 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| LL145_RS05170 (LL145_05170) | fliW | 1015352..1015741 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| LL145_RS05175 (LL145_05175) | proC | 1015741..1016472 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| LL145_RS05180 (LL145_05180) | ctsT | 1016469..1016771 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| LL145_RS05185 (LL145_05185) | - | 1016768..1017430 (+) | 663 | WP_002936695.1 | hypothetical protein | - |
| LL145_RS05190 (LL145_05190) | - | 1017427..1017879 (+) | 453 | WP_180819926.1 | hypothetical protein | - |
| LL145_RS05195 (LL145_05195) | hemD | 1017876..1018505 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| LL145_RS05200 (LL145_05200) | thiE | 1018483..1019115 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| LL145_RS05205 (LL145_05205) | thiD | 1019105..1019917 (-) | 813 | WP_002853647.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LL145_RS05210 (LL145_05210) | - | 1019914..1020600 (-) | 687 | WP_002853783.1 | endonuclease III domain-containing protein | - |
| LL145_RS05215 (LL145_05215) | - | 1020597..1021357 (-) | 761 | Protein_1010 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=623212 LL145_RS05180 WP_002853046.1 1016469..1016771(+) (ctsT) [Campylobacter jejuni strain 6-1197-19]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=623212 LL145_RS05180 WP_002853046.1 1016469..1016771(+) (ctsT) [Campylobacter jejuni strain 6-1197-19]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |