Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   LL142_RS06730 Genome accession   NZ_CP086168
Coordinates   1313235..1314203 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain CMP10190     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1308235..1319203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL142_RS06705 (LL142_06705) cdsA 1309144..1309869 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  LL142_RS06710 (LL142_06710) - 1309878..1310216 (-) 339 WP_002855905.1 hypothetical protein -
  LL142_RS06715 (LL142_06715) - 1310218..1311525 (-) 1308 WP_002905937.1 NFACT RNA binding domain-containing protein -
  LL142_RS06720 (LL142_06720) mobA 1311588..1312163 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  LL142_RS06725 (LL142_06725) pldA 1312160..1313149 (+) 990 WP_032590042.1 phospholipase A -
  LL142_RS06730 (LL142_06730) ceuB 1313235..1314203 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  LL142_RS06735 (LL142_06735) ceuC 1314196..1315134 (+) 939 WP_002905932.1 iron chelate uptake ABC transporter family permease subunit -
  LL142_RS06740 (LL142_06740) ceuD 1315131..1315886 (+) 756 WP_002873631.1 ABC transporter ATP-binding protein -
  LL142_RS06745 (LL142_06745) ceuB 1315899..1316891 (+) 993 WP_002873632.1 enterochelin ABC transporter substrate-binding protein CeuB -
  LL142_RS06750 (LL142_06750) - 1317046..1317267 (+) 222 WP_002856036.1 hypothetical protein -
  LL142_RS06755 (LL142_06755) - 1317268..1317549 (+) 282 WP_002856297.1 type II toxin-antitoxin system RelE/ParE family toxin -
  LL142_RS06765 (LL142_06765) - 1317909..1318463 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=623193 LL142_RS06730 WP_002872671.1 1313235..1314203(+) (ceuB) [Campylobacter jejuni strain CMP10190]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=623193 LL142_RS06730 WP_002872671.1 1313235..1314203(+) (ceuB) [Campylobacter jejuni strain CMP10190]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGGGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991