Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | LL142_RS05450 | Genome accession | NZ_CP086168 |
| Coordinates | 1056560..1056862 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CMP10190 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1051560..1061862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL142_RS05425 (LL142_05425) | rpsR | 1051923..1052183 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| LL142_RS05430 (LL142_05430) | lon | 1052243..1054618 (-) | 2376 | WP_227930707.1 | endopeptidase La | - |
| LL142_RS05435 (LL142_05435) | - | 1054635..1055282 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| LL142_RS05440 (LL142_05440) | fliW | 1055443..1055832 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| LL142_RS05445 (LL142_05445) | proC | 1055832..1056563 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| LL142_RS05450 (LL142_05450) | ctsT | 1056560..1056862 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| LL142_RS05455 (LL142_05455) | - | 1056859..1057521 (+) | 663 | WP_199381292.1 | hypothetical protein | - |
| LL142_RS05460 (LL142_05460) | - | 1057518..1057970 (+) | 453 | WP_199381291.1 | hypothetical protein | - |
| LL142_RS05465 (LL142_05465) | hemD | 1057967..1058596 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| LL142_RS05470 (LL142_05470) | thiE | 1058574..1059206 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| LL142_RS05475 (LL142_05475) | thiD | 1059196..1060008 (-) | 813 | WP_038816794.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LL142_RS05480 (LL142_05480) | - | 1060005..1060691 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| LL142_RS05485 (LL142_05485) | - | 1060688..1061449 (-) | 762 | WP_199381290.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=623186 LL142_RS05450 WP_002853046.1 1056560..1056862(+) (ctsT) [Campylobacter jejuni strain CMP10190]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=623186 LL142_RS05450 WP_002853046.1 1056560..1056862(+) (ctsT) [Campylobacter jejuni strain CMP10190]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |