Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   LL136_RS06705 Genome accession   NZ_CP086167
Coordinates   1312852..1313820 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain CMP10201     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1307852..1318820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL136_RS06680 (LL136_06680) cdsA 1308761..1309486 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  LL136_RS06685 (LL136_06685) - 1309495..1309833 (-) 339 WP_002855905.1 hypothetical protein -
  LL136_RS06690 (LL136_06690) - 1309835..1311142 (-) 1308 WP_002905937.1 NFACT RNA binding domain-containing protein -
  LL136_RS06695 (LL136_06695) mobA 1311205..1311780 (+) 576 WP_002853737.1 molybdenum cofactor guanylyltransferase -
  LL136_RS06700 (LL136_06700) pldA 1311777..1312766 (+) 990 WP_032590042.1 phospholipase A -
  LL136_RS06705 (LL136_06705) ceuB 1312852..1313820 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  LL136_RS06710 (LL136_06710) ceuC 1313813..1314751 (+) 939 WP_002905932.1 iron chelate uptake ABC transporter family permease subunit -
  LL136_RS06715 (LL136_06715) ceuD 1314748..1315503 (+) 756 WP_002873631.1 ABC transporter ATP-binding protein -
  LL136_RS06720 (LL136_06720) ceuB 1315516..1316508 (+) 993 WP_002873632.1 enterochelin ABC transporter substrate-binding protein CeuB -
  LL136_RS06725 (LL136_06725) - 1316663..1316884 (+) 222 WP_002856036.1 hypothetical protein -
  LL136_RS06730 (LL136_06730) - 1316885..1317166 (+) 282 WP_002856297.1 type II toxin-antitoxin system RelE/ParE family toxin -
  LL136_RS06740 (LL136_06740) - 1317526..1318080 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=623167 LL136_RS06705 WP_002872671.1 1312852..1313820(+) (ceuB) [Campylobacter jejuni strain CMP10201]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=623167 LL136_RS06705 WP_002872671.1 1312852..1313820(+) (ceuB) [Campylobacter jejuni strain CMP10201]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGGGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991