Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | LL136_RS05765 | Genome accession | NZ_CP086167 |
| Coordinates | 1123725..1124684 (+) | Length | 319 a.a. |
| NCBI ID | WP_002852903.1 | Uniprot ID | A0A5Y6P8U5 |
| Organism | Campylobacter jejuni strain CMP10201 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1118725..1129684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL136_RS05740 (LL136_05740) | neuB | 1119227..1120267 (+) | 1041 | WP_227930710.1 | N-acetylneuraminate synthase | - |
| LL136_RS05745 (LL136_05745) | neuC | 1120264..1121382 (+) | 1119 | WP_199381276.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| LL136_RS05750 (LL136_05750) | - | 1121379..1122044 (+) | 666 | WP_002878820.1 | cytidylyltransferase domain-containing protein | - |
| LL136_RS05755 (LL136_05755) | - | 1122032..1122862 (+) | 831 | WP_002894652.1 | CatB-related O-acetyltransferase | - |
| LL136_RS05760 (LL136_05760) | waaV | 1122854..1123666 (-) | 813 | WP_199381275.1 | glycosyltransferase family 2 protein | - |
| LL136_RS05765 (LL136_05765) | waaF | 1123725..1124684 (+) | 960 | WP_002852903.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| LL136_RS05770 (LL136_05770) | gmhA | 1124665..1125225 (-) | 561 | WP_023890815.1 | D-sedoheptulose 7-phosphate isomerase | - |
| LL136_RS05775 (LL136_05775) | rfaE1 | 1125222..1126607 (-) | 1386 | WP_199381274.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| LL136_RS05780 (LL136_05780) | rfaD | 1126600..1127553 (-) | 954 | WP_002856483.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| LL136_RS05785 (LL136_05785) | gmhB | 1127554..1128114 (-) | 561 | WP_052795201.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| LL136_RS05790 (LL136_05790) | - | 1128196..1128498 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| LL136_RS05795 (LL136_05795) | ccoS | 1128521..1128727 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36766.44 Da Isoelectric Point: 10.4054
>NTDB_id=623162 LL136_RS05765 WP_002852903.1 1123725..1124684(+) (waaF) [Campylobacter jejuni strain CMP10201]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=623162 LL136_RS05765 WP_002852903.1 1123725..1124684(+) (waaF) [Campylobacter jejuni strain CMP10201]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.984 |
100 |
0.95 |