Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | LL136_RS05430 | Genome accession | NZ_CP086167 |
| Coordinates | 1056178..1056480 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CMP10201 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1051178..1061480
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL136_RS05405 (LL136_05405) | rpsR | 1051541..1051801 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| LL136_RS05410 (LL136_05410) | lon | 1051861..1054236 (-) | 2376 | WP_227930707.1 | endopeptidase La | - |
| LL136_RS05415 (LL136_05415) | - | 1054253..1054900 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| LL136_RS05420 (LL136_05420) | fliW | 1055061..1055450 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| LL136_RS05425 (LL136_05425) | proC | 1055450..1056181 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| LL136_RS05430 (LL136_05430) | ctsT | 1056178..1056480 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| LL136_RS05435 (LL136_05435) | - | 1056477..1057139 (+) | 663 | WP_199381292.1 | hypothetical protein | - |
| LL136_RS05440 (LL136_05440) | - | 1057136..1057588 (+) | 453 | WP_199381291.1 | hypothetical protein | - |
| LL136_RS05445 (LL136_05445) | hemD | 1057585..1058214 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| LL136_RS05450 (LL136_05450) | thiE | 1058192..1058824 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| LL136_RS05455 (LL136_05455) | thiD | 1058814..1059626 (-) | 813 | WP_038816794.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LL136_RS05460 (LL136_05460) | - | 1059623..1060309 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| LL136_RS05465 (LL136_05465) | - | 1060306..1061067 (-) | 762 | WP_199381290.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=623160 LL136_RS05430 WP_002853046.1 1056178..1056480(+) (ctsT) [Campylobacter jejuni strain CMP10201]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=623160 LL136_RS05430 WP_002853046.1 1056178..1056480(+) (ctsT) [Campylobacter jejuni strain CMP10201]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |