Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | LL135_RS05435 | Genome accession | NZ_CP086162 |
| Coordinates | 1054973..1055275 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain SHI3134 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1049973..1060275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL135_RS05410 (LL135_05410) | rpsR | 1050336..1050596 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| LL135_RS05415 (LL135_05415) | lon | 1050656..1053031 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| LL135_RS05420 (LL135_05420) | - | 1053048..1053695 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| LL135_RS05425 (LL135_05425) | fliW | 1053856..1054245 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| LL135_RS05430 (LL135_05430) | proC | 1054245..1054976 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| LL135_RS05435 (LL135_05435) | ctsT | 1054973..1055275 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| LL135_RS05440 (LL135_05440) | - | 1055272..1055934 (+) | 663 | WP_002936695.1 | hypothetical protein | - |
| LL135_RS05445 (LL135_05445) | - | 1055931..1056383 (+) | 453 | WP_180819926.1 | hypothetical protein | - |
| LL135_RS05450 (LL135_05450) | hemD | 1056380..1057009 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| LL135_RS05455 (LL135_05455) | thiE | 1056987..1057619 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| LL135_RS05460 (LL135_05460) | thiD | 1057609..1058421 (-) | 813 | WP_002853647.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| LL135_RS05465 (LL135_05465) | - | 1058418..1059104 (-) | 687 | WP_002853783.1 | endonuclease III domain-containing protein | - |
| LL135_RS05470 (LL135_05470) | - | 1059101..1059861 (-) | 761 | Protein_1059 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=623025 LL135_RS05435 WP_002853046.1 1054973..1055275(+) (ctsT) [Campylobacter jejuni strain SHI3134]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=623025 LL135_RS05435 WP_002853046.1 1054973..1055275(+) (ctsT) [Campylobacter jejuni strain SHI3134]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |