Detailed information NTG0622759

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5T24_RS22805
• Genome accession: NZ_CP103529
• Coordinates: 4737289..4738314 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 5270
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4732289..4743314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5T24_RS22785 (M5T24_22785)	metJ	4733350..4733667 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5T24_RS22790 (M5T24_22790)	yiiX	4733851..4734459 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M5T24_RS22795 (M5T24_22795)	rpmE	4734520..4734732 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5T24_RS22800 (M5T24_22800)	priA	4734935..4737133 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
M5T24_RS22805 (M5T24_22805)	cytR	4737289..4738314 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M5T24_RS22810 (M5T24_22810)	ftsN	4738406..4739365 (+)	960	WP_000068828.1	cell division protein FtsN	-
M5T24_RS22815 (M5T24_22815)	hslV	4739458..4739988 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5T24_RS22820 (M5T24_22820)	hslU	4739998..4741329 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M5T24_RS22825 (M5T24_22825)	menA	4741396..4742322 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5T24_RS22830 (M5T24_22830)	rraA	4742415..4742900 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5T24_RS22835 (M5T24_22835)	zapB	4742985..4743230 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=622759 M5T24_RS22805 WP_000644904.1 4737289..4738314(+) (cytR) [Escherichia coli strain 5270]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=622759 M5T24_RS22805 WP_000644904.1 4737289..4738314(+) (cytR) [Escherichia coli strain 5270]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628