Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   LL022_RS07585 Genome accession   NZ_CP086101
Coordinates   1611348..1611974 (+) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain 994590     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1606348..1616974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LL022_RS07565 (LL022_07575) - 1606742..1608502 (-) 1761 WP_025204537.1 Lon protease family protein -
  LL022_RS07570 (LL022_07580) matP 1608689..1609141 (+) 453 WP_014169429.1 macrodomain Ter protein MatP -
  LL022_RS07575 (LL022_07585) ompA 1609211..1610266 (-) 1056 WP_020884794.1 porin OmpA -
  LL022_RS07580 (LL022_07590) sulA 1610621..1611130 (-) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  LL022_RS07585 (LL022_07595) sxy/tfoX 1611348..1611974 (+) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  LL022_RS07590 (LL022_07600) yccS 1611931..1614093 (-) 2163 WP_020884791.1 YccS family putative transporter -
  LL022_RS07595 (LL022_07605) - 1614113..1614559 (-) 447 WP_014169434.1 YccF domain-containing protein -
  LL022_RS07600 (LL022_07610) helD 1614683..1616737 (+) 2055 WP_228175741.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=622511 LL022_RS07585 WP_020884792.1 1611348..1611974(+) (sxy/tfoX) [Enterobacter ludwigii strain 994590]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=622511 LL022_RS07585 WP_020884792.1 1611348..1611974(+) (sxy/tfoX) [Enterobacter ludwigii strain 994590]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGATGGGGAACTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCGTCATTTTTAACCCTGATGAAACGGGGTCGTCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGGGCCCGTGCGAGCTGGCTGAAGATGCGGGCGAAGAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCATTGGAAGGGGCCATCGCCGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577