Detailed information NTG0622505

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M5T03_RS23060
• Genome accession: NZ_CP103508
• Coordinates: 4714211..4715236 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain 5506
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4709211..4720236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5T03_RS23040 (M5T03_23040)	metJ	4710396..4710713 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M5T03_RS23045 (M5T03_23045)	yiiX	4710773..4711381 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M5T03_RS23050 (M5T03_23050)	rpmE	4711442..4711654 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M5T03_RS23055 (M5T03_23055)	priA	4711857..4714055 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M5T03_RS23060 (M5T03_23060)	cytR	4714211..4715236 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M5T03_RS23065 (M5T03_23065)	ftsN	4715328..4716287 (+)	960	WP_000068834.1	cell division protein FtsN	-
M5T03_RS23070 (M5T03_23070)	hslV	4716380..4716910 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M5T03_RS23075 (M5T03_23075)	hslU	4716920..4718251 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M5T03_RS23080 (M5T03_23080)	menA	4718318..4719244 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M5T03_RS23085 (M5T03_23085)	rraA	4719337..4719822 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M5T03_RS23090 (M5T03_23090)	zapB	4719907..4720152 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=622505 M5T03_RS23060 WP_000644908.1 4714211..4715236(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 5506]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=622505 M5T03_RS23060 WP_000644908.1 4714211..4715236(+) (cytR) [Escherichia coli O25b:H4-ST131 strain 5506]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625