Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   LK685_RS19700 Genome accession   NZ_CP086061
Coordinates   3778509..3778649 (-) Length   46 a.a.
NCBI ID   WP_229762786.1    Uniprot ID   -
Organism   Bacillus sp. BC1-43     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3773509..3783649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK685_RS19695 (LK685_19700) - 3777391..3778563 (-) 1173 Protein_3871 condensation domain-containing protein -
  LK685_RS19700 (LK685_19705) comS 3778509..3778649 (-) 141 WP_229762786.1 competence protein ComS Regulator
  LK685_RS19705 (LK685_19710) srfAB 3778693..3781785 (-) 3093 Protein_3873 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5304.14 Da        Isoelectric Point: 9.2422

>NTDB_id=622213 LK685_RS19700 WP_229762786.1 3778509..3778649(-) (comS) [Bacillus sp. BC1-43]
MNRSGKHLISSIILYPRPSGECIFSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=622213 LK685_RS19700 WP_229762786.1 3778509..3778649(-) (comS) [Bacillus sp. BC1-43]
TTGAATCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATTCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978