Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LK685_RS15650 Genome accession   NZ_CP086061
Coordinates   2994489..2994680 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. BC1-43     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2989489..2999680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK685_RS15625 (LK685_15630) appD 2989814..2990800 (-) 987 WP_229762429.1 oligopeptide ABC transporter ATP-binding protein AppD -
  LK685_RS15630 (LK685_15635) - 2990992..2991777 (-) 786 WP_033883592.1 DUF2268 domain-containing protein -
  LK685_RS15635 (LK685_15640) fabF 2991853..2993094 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  LK685_RS15640 (LK685_15645) fabH 2993117..2994055 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  LK685_RS15645 (LK685_15650) yjzB 2994220..2994459 (+) 240 WP_003232972.1 spore coat protein YjzB -
  LK685_RS15650 (LK685_15655) comZ 2994489..2994680 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  LK685_RS15655 (LK685_15660) med 2994695..2995648 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  LK685_RS15660 (LK685_15665) - 2995738..2996295 (-) 558 WP_229762430.1 hypothetical protein -
  LK685_RS15665 (LK685_15670) - 2996377..2997111 (-) 735 WP_032721340.1 hypothetical protein -
  LK685_RS15670 (LK685_15675) - 2997360..2997545 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  LK685_RS15675 (LK685_15680) - 2997591..2997770 (-) 180 WP_003245356.1 YjzC family protein -
  LK685_RS15680 (LK685_15685) argF 2997856..2998815 (-) 960 WP_229762431.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=622199 LK685_RS15650 WP_003224559.1 2994489..2994680(-) (comZ) [Bacillus sp. BC1-43]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=622199 LK685_RS15650 WP_003224559.1 2994489..2994680(-) (comZ) [Bacillus sp. BC1-43]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1