Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GOZ34_RS03605 Genome accession   NZ_AP019712
Coordinates   765119..766090 (+) Length   323 a.a.
NCBI ID   WP_155978015.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Tokyo12480     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 760119..771090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOZ34_RS03590 (TMSFP480_06810) nrdI 761192..761590 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  GOZ34_RS03595 (TMSFP480_06820) nrdE 761553..763658 (+) 2106 WP_000855505.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  GOZ34_RS03600 (TMSFP480_06830) nrdF 763778..764749 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  GOZ34_RS03605 (TMSFP480_06850) ceuB 765119..766090 (+) 972 WP_155978015.1 ABC transporter permease Machinery gene
  GOZ34_RS03610 (TMSFP480_06860) - 766077..767033 (+) 957 WP_070974043.1 iron chelate uptake ABC transporter family permease subunit -
  GOZ34_RS03615 (TMSFP480_06870) - 767030..767791 (+) 762 WP_000616865.1 ABC transporter ATP-binding protein -
  GOZ34_RS03620 (TMSFP480_06880) - 767910..768938 (+) 1029 WP_155978017.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  GOZ34_RS03625 (TMSFP480_06890) - 769199..769513 (-) 315 WP_001123293.1 CHY zinc finger protein -
  GOZ34_RS03630 (TMSFP480_06900) murB 769531..770454 (-) 924 WP_000608436.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35543.97 Da        Isoelectric Point: 10.1174

>NTDB_id=62201 GOZ34_RS03605 WP_155978015.1 765119..766090(+) (ceuB) [Staphylococcus aureus strain Tokyo12480]
MKYLLKGKILLLLLILLTIISLFIGVSELSINDIFHLSDSQQNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSISGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=62201 GOZ34_RS03605 WP_155978015.1 765119..766090(+) (ceuB) [Staphylococcus aureus strain Tokyo12480]
ATGAAGTATTTATTAAAGGGAAAAATTTTGCTTCTATTACTTATATTGCTAACAATCATTTCGTTGTTTATAGGTGTCAG
TGAACTGTCTATTAACGATATCTTTCATTTATCAGACTCACAGCAAAATATATTGTTCTCAAGCCGAATACCGAGAACGA
TGAGTATTTTAATTGCTGGAAGTTCATTAGCTTTAGCTGGCCTAATCATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCAACTACAGCTGGGACGATGGAGTGGGCAAAATTAGGTATCTTAATTGCCTTATTATTCTTTCCAACTGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGCATCAGCGGAACATTTTTATTTGTTAAAATTATTGATTTTATCAAAGTAA
AAGATGTCATCTTTGTACCACTATTAGGGATTATGATGGGTGGCATTGTCGCTAGTTTTACAACGTTTATCTCATTACGT
ACAAACGCAGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGTTATGAAATATTGTA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCAAATCATTTCACAATTGTAGGAATGGGTAAAGACTTTACCA
ATAATTTAGGTTTGAGTTATGAAAAATTAATCAATATTGCTCTATTTATTACTGCCACAATTACGGCATTAGTCGTTGTG
ACAGTTGGAACTTTACCCTTCTTAGGTTTAGTTATTCCAAATATTATTTCGATTTATAGAGGCGATCATTTAAAAAATGC
AATTCCTCATACGATGATGTTAGGAGCCATCTTTGTATTGTTTTCTGATATAGTTGGCAGAATTGTAGTTTATCCATATG
AAATTAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTACTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471