Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | LJC78_RS06340 | Genome accession | NZ_CP086007 |
| Coordinates | 1219781..1220932 (+) | Length | 383 a.a. |
| NCBI ID | WP_014479449.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. natto strain SCP010-1 | ||
| Function | homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake |
||
Genomic Context
Location: 1214781..1225932
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJC78_RS06305 (LJC78_06305) | yjbB | 1215453..1216670 (+) | 1218 | WP_072592593.1 | MFS transporter | - |
| LJC78_RS06310 (LJC78_06310) | yjbC | 1216834..1217412 (+) | 579 | WP_003224597.1 | GNAT family N-acetyltransferase | - |
| LJC78_RS06315 (LJC78_06315) | spx | 1217593..1217988 (+) | 396 | WP_014476435.1 | transcriptional regulator Spx | - |
| LJC78_RS06320 (LJC78_06320) | yjbE | 1218031..1218687 (-) | 657 | WP_014479447.1 | TerC family protein | - |
| LJC78_RS06325 (LJC78_06325) | - | 1218857..1218997 (+) | 141 | WP_119122854.1 | hypothetical protein | - |
| LJC78_RS06330 (LJC78_06330) | mecA | 1218964..1219620 (+) | 657 | WP_014479448.1 | adaptor protein MecA | Regulator |
| LJC78_RS06335 (LJC78_06335) | - | 1219615..1219737 (-) | 123 | WP_003245684.1 | hypothetical protein | - |
| LJC78_RS06340 (LJC78_06340) | coiA | 1219781..1220932 (+) | 1152 | WP_014479449.1 | competence protein CoiA | Machinery gene |
| LJC78_RS06345 (LJC78_06345) | pepF | 1221162..1222991 (+) | 1830 | WP_173401378.1 | oligoendopeptidase F | - |
| LJC78_RS06350 (LJC78_06350) | - | 1223029..1223196 (-) | 168 | WP_003244944.1 | hypothetical protein | - |
| LJC78_RS06355 (LJC78_06355) | spxH | 1223511..1224410 (-) | 900 | WP_003245184.1 | protease adaptor protein SpxH | - |
| LJC78_RS06360 (LJC78_06360) | bhbI | 1224407..1224805 (-) | 399 | WP_003232928.1 | group 2 truncated hemoglobin YjbI | - |
| LJC78_RS06365 (LJC78_06365) | cwlQ | 1225060..1225794 (-) | 735 | WP_014479451.1 | bifunctional muramidase/murein lytic transglycosylase | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 44861.98 Da Isoelectric Point: 9.9417
>NTDB_id=621957 LJC78_RS06340 WP_014479449.1 1219781..1220932(+) (coiA) [Bacillus subtilis subsp. natto strain SCP010-1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE
Nucleotide
Download Length: 1152 bp
>NTDB_id=621957 LJC78_RS06340 WP_014479449.1 1219781..1220932(+) (coiA) [Bacillus subtilis subsp. natto strain SCP010-1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Bacillus subtilis subsp. subtilis str. 168 |
98.391 |
97.389 |
0.958 |