Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   HIFGL_RS01470 Genome accession   NC_022356
Coordinates   295904..296200 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae KR494     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 290904..301200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIFGL_RS01445 (HifGL_000282) - 291131..291694 (-) 564 WP_021034570.1 DNA-3-methyladenine glycosylase I -
  HIFGL_RS01450 (HifGL_000284) aroE 291908..292714 (-) 807 WP_021034572.1 shikimate dehydrogenase -
  HIFGL_RS01455 (HifGL_000285) - 292718..293269 (-) 552 WP_021034573.1 Sua5/YciO/YrdC/YwlC family protein -
  HIFGL_RS01460 (HifGL_000286) - 293285..293821 (-) 537 WP_021034574.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  HIFGL_RS01465 (HifGL_000287) - 293831..295747 (-) 1917 WP_021034575.1 ABC transporter ATP-binding protein -
  HIFGL_RS01470 (HifGL_000288) HI0659 295904..296200 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  HIFGL_RS01475 (HifGL_000289) - 296193..296552 (-) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  HIFGL_RS01480 (HifGL_000290) - 296813..299788 (-) 2976 WP_021034576.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  HIFGL_RS09575 - 300151..300240 (+) 90 Protein_283 ABC transporter -
  HIFGL_RS09580 - 300364..300453 (+) 90 Protein_284 ABC transporter -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=62159 HIFGL_RS01470 WP_005650837.1 295904..296200(-) (HI0659) [Haemophilus influenzae KR494]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=62159 HIFGL_RS01470 WP_005650837.1 295904..296200(-) (HI0659) [Haemophilus influenzae KR494]
ATGAATAAAATTAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1

Multiple sequence alignment