Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   LK431_RS02470 Genome accession   NZ_CP085951
Coordinates   482938..483234 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain FDAARGOS_1561     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 477938..488234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK431_RS02445 (LK431_02445) - 478349..478906 (-) 558 WP_111695309.1 DNA-3-methyladenine glycosylase I -
  LK431_RS02450 (LK431_02450) aroE 478903..479721 (-) 819 WP_111695308.1 shikimate dehydrogenase -
  LK431_RS02455 (LK431_02455) - 479725..480276 (-) 552 WP_042593999.1 Sua5/YciO/YrdC/YwlC family protein -
  LK431_RS02460 (LK431_02460) - 480292..480828 (-) 537 WP_111695307.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  LK431_RS02465 (LK431_02465) - 480838..482754 (-) 1917 WP_111695306.1 ABC transporter ATP-binding protein -
  LK431_RS02470 (LK431_02470) HI0659 482938..483234 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  LK431_RS02475 (LK431_02475) - 483227..483586 (-) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  LK431_RS02480 (LK431_02480) - 483856..486878 (-) 3023 Protein_456 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=621552 LK431_RS02470 WP_005650837.1 482938..483234(-) (HI0659) [Haemophilus influenzae strain FDAARGOS_1561]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=621552 LK431_RS02470 WP_005650837.1 482938..483234(-) (HI0659) [Haemophilus influenzae strain FDAARGOS_1561]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGCGAAAG
TAATTTACGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAACAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1