Detailed information NTG0621481

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: LK447_RS02530
• Genome accession: NZ_CP085947
• Coordinates: 518960..520399 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748975.1
• Uniprot ID: B5Z9E2
• Organism: Helicobacter pylori strain FDAARGOS_1563
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 513960..525399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK447_RS02505 (LK447_02505)	recG	515086..516957 (-)	1872	WP_001158345.1	ATP-dependent DNA helicase RecG	-
LK447_RS02510 (LK447_02510)	-	517039..517392 (+)	354	WP_000836988.1	hypothetical protein	-
LK447_RS02515 (LK447_02515)	-	517396..518031 (+)	636	WP_000668036.1	outer membrane protein	-
LK447_RS02520 (LK447_02520)	-	518028..518780 (-)	753	WP_000767570.1	exodeoxyribonuclease III	-
LK447_RS02530 (LK447_02530)	comH	518960..520399 (-)	1440	WP_000748975.1	hypothetical protein	Machinery gene
LK447_RS02535 (LK447_02535)	dnaA	520620..521987 (-)	1368	WP_000380615.1	chromosomal replication initiator protein DnaA	-
LK447_RS02540 (LK447_02540)	-	522139..522681 (+)	543	WP_000923002.1	hypothetical protein	-
LK447_RS02545 (LK447_02545)	-	522717..522956 (+)	240	WP_000462051.1	DUF2443 family protein	-
LK447_RS02550 (LK447_02550)	glmS	522957..524750 (+)	1794	WP_000334439.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54784.64 Da
• Isoelectric Point: 6.9523

>NTDB_id=621481 LK447_RS02530 WP_000748975.1 518960..520399(-) (comH) [Helicobacter pylori strain FDAARGOS_1563]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPPQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADSNENNENNENRDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDADKQTATDITSCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=621481 LK447_RS02530 WP_000748975.1 518960..520399(-) (comH) [Helicobacter pylori strain FDAARGOS_1563]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCCCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAATACCCAAATCGTTTTTTCTTCAAAAGA
ACTGAAAGAAGCACACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCTAGTTCATCGC
AACAACCTCCTCAAAACTTTTCTTATCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATAGTA
ATGAAAACAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGCAGACAAACA
GACTGCGACAGATATTACCTCTTGCGATTACAGCACCGCTGAAAATAAAAGTGGTAAAATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTACGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: B5Z9E2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.66	100	0.967