Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   LK450_RS08970 Genome accession   NZ_CP085939
Coordinates   1816954..1818720 (+) Length   588 a.a.
NCBI ID   WP_003031770.1    Uniprot ID   A0A3S4M311
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1811954..1823720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS08950 (LK450_08950) - 1812794..1814692 (+) 1899 WP_003031802.1 sucrose-specific PTS transporter subunit IIBC -
  LK450_RS08955 (LK450_08955) scrK 1814968..1815867 (+) 900 WP_018543579.1 fructokinase ScrK -
  LK450_RS08960 (LK450_08960) - 1815935..1816345 (+) 411 WP_003031760.1 peptide deformylase -
  LK450_RS08965 (LK450_08965) - 1816503..1816961 (+) 459 WP_003031754.1 MarR family winged helix-turn-helix transcriptional regulator -
  LK450_RS08970 (LK450_08970) rcrP 1816954..1818720 (+) 1767 WP_003031770.1 ABC transporter ATP-binding protein Regulator
  LK450_RS08975 (LK450_08975) rcrQ 1818710..1820470 (+) 1761 WP_003031741.1 ABC transporter ATP-binding protein Regulator
  LK450_RS08980 (LK450_08980) - 1820680..1820994 (+) 315 WP_003031794.1 PTS cellobiose transporter subunit IIB -
  LK450_RS08985 (LK450_08985) - 1821005..1821325 (+) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  LK450_RS08990 (LK450_08990) - 1821459..1822856 (-) 1398 WP_018543578.1 glycoside hydrolase family 1 protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65574.20 Da        Isoelectric Point: 5.4584

>NTDB_id=621445 LK450_RS08970 WP_003031770.1 1816954..1818720(+) (rcrP) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MFKLFKRLTVKEVGMIVISILFTCLTVYLELEVPTYISKITELLQTKGTVVSDLWNPGLKMIGLSFASFLSAVTVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNMIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAEANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVMGFMLMGALFIILPRTLVSAGRINEVLDLY
STIESPEHPKEAKDIKGEVVFDNVSFRYDKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKIGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWSALDLAQAKSFVEEKEGGLHSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKATTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLETNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=621445 LK450_RS08970 WP_003031770.1 1816954..1818720(+) (rcrP) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGTTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTGTCATCAGCATTTTGTTTACTTGTTTAACAGT
TTATTTAGAATTAGAGGTTCCGACTTATATTTCAAAAATTACGGAACTCCTCCAAACGAAAGGAACAGTAGTTTCTGACT
TGTGGAATCCAGGTTTGAAAATGATTGGATTGTCTTTTGCGAGCTTTCTTAGTGCTGTGACAGTTGGCTTTATTGCGGCT
AGATTGGCGGCTAGCTTTACAACGAGTTTGCGGTCAGATATTTTCAATCGTGTACTGGATTATTCAGATGCTGAGATTAA
GAGATTCTCTATTCCGAGTCTTTTGACGCGGACAACCAACGATCTTACGCAAATTCAACTTATGATTACTATGGGCTTGC
AAGTCGTGACTCGTGGGCCGATTATGGCGATTTGGGCGATTACAAAAATCATTGGGAAATCAGAATACTGGCTCTGGGCA
GTTATTGTCGCAGTTATTGTGAATATGATTATGACGACAGTTTTGATGACGTTGGCCTTTCCAAAGCAATCTGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTACAATGCTGAAG
ACTATCAAGATGACAAATTTGCAGAGGCAAATGATGAAGTGACTCGGTTGAATCTCTTTGTTAGTCGGCTCATGGCTATT
TTAAATCCGATTATGATGGGGATTTCGAGTGGTTTGACCTTGGCAATATACTGGATTGGTGCTTACTTGATTCAAGATGC
AGCTTTACCAGAGCGCTTGCCTATCTTTAGTGATATGGTAGTCTTTATGTCTTATGCCATGCAAGTGGTGATGGGCTTCA
TGCTCATGGGTGCTCTTTTTATCATTCTACCTCGTACCTTGGTATCTGCTGGGCGGATCAATGAAGTACTTGATTTATAT
TCAACGATTGAGTCTCCAGAACACCCTAAAGAAGCTAAAGATATTAAAGGAGAAGTGGTCTTTGATAATGTGTCTTTCCG
CTATGATAAAAATTCTGAGGCTGTCATTGAGCATGTCAGCTTTACAGCCAAAGCAGGCGAAACGGTGGCTTTCATTGGTT
CAACCGGTTCTGGGAAATCCACTTTAATCAGCTTAATTCCTCGTTTCTATGATGTGACAGAAGGAAGAATTTTAGTAGAT
GGCGTGAATGTAAAAGATTATCAGTTGGAAGATTTGCATAATAAAATTGGCTACATTCCACAAAAAGCTGTTCTCTTTTC
TGGTGATATAAAGAGTAATTTAGATTTTGGACAAAGCAATGAAAGTCCATTGGATGATGAAAAAATGTGGTCTGCGTTGG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGGTTGCACAAAGCGGAACCAATTTC
TCTGGTGGTCAAAAGCAGCGGTTGGCGATTGCGCGTGCACTTGCTAGGAAACCTGAAATTCTGATTTTTGACGATTCATT
TTCAGCACTGGACTATAAGACAGACCGTATTTTGCGAGAAGAATTGGCGAAAAAAGTGAAAGCTACAACCAGATTGATTG
TAGCTCAGCGGATTTCAACGATCATGGATGCTGATCAGATCTTGGTATTGGATAAAGGGAAGGTTGTTGGGCAAGGGACT
CACAAAGAGCTACTAGAGACCAACGAAGTTTATCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-291)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S4M311

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.667

100

0.721