Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   LK450_RS05405 Genome accession   NZ_CP085939
Coordinates   1113347..1114078 (-) Length   243 a.a.
NCBI ID   WP_004344524.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1108347..1119078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS05380 (LK450_05380) rimP 1108779..1109267 (-) 489 WP_004224979.1 ribosome maturation factor RimP -
  LK450_RS05385 (LK450_05385) - 1109518..1110207 (-) 690 WP_026248194.1 VIT family protein -
  LK450_RS05390 (LK450_05390) trmB 1110824..1111459 (-) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  LK450_RS05395 (LK450_05395) ccrZ 1111456..1112253 (-) 798 WP_003043230.1 cell cycle regulator CcrZ -
  LK450_RS05400 (LK450_05400) - 1112304..1113350 (-) 1047 WP_004225005.1 ABC transporter permease -
  LK450_RS05405 (LK450_05405) pptA 1113347..1114078 (-) 732 WP_004344524.1 ABC transporter ATP-binding protein Regulator
  LK450_RS05410 (LK450_05410) - 1114147..1114557 (+) 411 WP_004344535.1 HIT family protein -
  LK450_RS05415 (LK450_05415) - 1114567..1114854 (+) 288 WP_004224964.1 hypothetical protein -
  LK450_RS05420 (LK450_05420) brpA 1114901..1116016 (-) 1116 WP_004224985.1 biofilm formation/cell division transcriptional regulator BrpA -
  LK450_RS05425 (LK450_05425) - 1116023..1116544 (-) 522 WP_003033089.1 GNAT family N-acetyltransferase -
  LK450_RS05430 (LK450_05430) tsaE 1116537..1116977 (-) 441 WP_004344533.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  LK450_RS05435 (LK450_05435) - 1117315..1118754 (-) 1440 WP_004225012.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26859.52 Da        Isoelectric Point: 4.9159

>NTDB_id=621412 LK450_RS05405 WP_004344524.1 1113347..1114078(-) (pptA) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MLEIKGLTGGYVNIPVLKDISFTVGNGKLVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTVYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=621412 LK450_RS05405 WP_004344524.1 1113347..1114078(-) (pptA) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GAAATTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATTGGACTTTTAACACCTT
ATAAGGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACAGTTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCGCGCGTGGAGAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTGGATTGGTTTCCGGTGCATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTGGGACTTGATCCAGTTGCTATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTCAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTACATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.385

98.354

0.712
  pptA Streptococcus salivarius strain HSISS4

71.967

98.354

0.708