Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   LK450_RS04675 Genome accession   NZ_CP085939
Coordinates   966753..967463 (+) Length   236 a.a.
NCBI ID   WP_018543649.1    Uniprot ID   A0A3E5D3H7
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 961753..972463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS04665 (LK450_04665) treC 962721..964352 (-) 1632 WP_003032374.1 alpha,alpha-phosphotrehalase -
  LK450_RS04670 (LK450_04670) treP 964562..966574 (-) 2013 WP_003025673.1 PTS system trehalose-specific EIIBC component -
  LK450_RS04675 (LK450_04675) treR 966753..967463 (+) 711 WP_018543649.1 trehalose operon repressor Regulator
  LK450_RS04680 (LK450_04680) - 967616..968956 (-) 1341 WP_003032360.1 hemolysin family protein -
  LK450_RS04685 (LK450_04685) - 969070..970716 (-) 1647 WP_003032348.1 phosphoenolpyruvate carboxykinase (ATP) -
  LK450_RS04690 (LK450_04690) - 970938..972062 (-) 1125 WP_003032350.1 AI-2E family transporter -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27623.65 Da        Isoelectric Point: 9.4591

>NTDB_id=621402 LK450_RS04675 WP_018543649.1 966753..967463(+) (treR) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MKKYEQIFKLLEQDILNEKYQINNYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSISREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=621402 LK450_RS04675 WP_018543649.1 966753..967463(+) (treR) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATAAATAATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
CCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACTAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTTGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTCTCCAAACGGCAAAAATGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3E5D3H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

63.983

100

0.64