Detailed information NTG0621290

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: LK454_RS05995
• Genome accession: NZ_CP085923
• Coordinates: 1231055..1232494 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748989.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain FDAARGOS_1601
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1226055..1237494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK454_RS05970 (LK454_05970)	recG	1227182..1229053 (-)	1872	WP_001158353.1	ATP-dependent DNA helicase RecG	-
LK454_RS05975 (LK454_05975)	-	1229135..1229488 (+)	354	WP_000837019.1	hypothetical protein	-
LK454_RS05980 (LK454_05980)	-	1229492..1230127 (+)	636	WP_000668065.1	outer membrane protein	-
LK454_RS05985 (LK454_05985)	-	1230124..1230876 (-)	753	WP_000767550.1	exodeoxyribonuclease III	-
LK454_RS05995 (LK454_05995)	comH	1231055..1232494 (-)	1440	WP_000748989.1	hypothetical protein	Machinery gene
LK454_RS06000 (LK454_06000)	dnaA	1232714..1234081 (-)	1368	WP_054833634.1	chromosomal replication initiator protein DnaA	-
LK454_RS06005 (LK454_06005)	-	1234234..1234776 (+)	543	WP_000922988.1	hypothetical protein	-
LK454_RS06010 (LK454_06010)	-	1234821..1235060 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
LK454_RS06015 (LK454_06015)	glmS	1235061..1236854 (+)	1794	WP_000334432.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54906.81 Da
• Isoelectric Point: 6.5953

>NTDB_id=621290 LK454_RS05995 WP_000748989.1 1231055..1232494(-) (comH) [Helicobacter pylori strain FDAARGOS_1601]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEVHPHQMPSLNAPMQKPQNKPNSSQQSPQNFSYPESKLGSKNSKNSLLQPL
AIPSKINPTNEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADINENNESNENRDNVEKQAVRDANVKEFA
CGKWVYDDENLQAYRPSILKRVDEDRQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=621290 LK454_RS05995 WP_000748989.1 1231055..1232494(-) (comH) [Helicobacter pylori strain FDAARGOS_1601]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACTCTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTAAAAGAAGTGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCAACTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAACCCCACTAACGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTA
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCGTTAGAGATGCTAATGTTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAGACA
GACTGCGACAGACATCACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.825	100	0.958