Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N564_RS05320 | Genome accession | NC_022352 |
| Coordinates | 1014148..1014450 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni 00-2426 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1009148..1019450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N564_RS05295 (N564_01040) | rpsR | 1009510..1009770 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N564_RS05300 (N564_01041) | lon | 1009831..1012206 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| N564_RS05305 (N564_01042) | - | 1012223..1012870 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N564_RS05310 (N564_01043) | fliW | 1013031..1013420 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N564_RS05315 (N564_01044) | proC | 1013420..1014151 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N564_RS05320 (N564_01045) | ctsT | 1014148..1014450 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| N564_RS05325 (N564_01046) | - | 1014447..1015109 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| N564_RS05330 (N564_01047) | - | 1015106..1015558 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| N564_RS05335 (N564_01048) | hemD | 1015555..1016184 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| N564_RS05340 (N564_01049) | thiE | 1016162..1016794 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| N564_RS05345 (N564_01050) | thiD | 1016784..1017596 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N564_RS05350 (N564_01051) | - | 1017593..1018279 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| N564_RS05355 (N564_01052) | - | 1018276..1019037 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=62100 N564_RS05320 WP_002853046.1 1014148..1014450(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2426]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=62100 N564_RS05320 WP_002853046.1 1014148..1014450(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2426]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |