Detailed information NTG0620879

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: JK088_RS20835
• Genome accession: NZ_CP085858
• Coordinates: 1095689..1096786 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain LH214
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1090689..1101786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JK088_RS20820 (JK088_20820)	-	1091353..1092408 (-)	1056	WP_017447362.1	HlyD family secretion protein	-
JK088_RS20825 (JK088_20825)	slyA	1092446..1092901 (-)	456	WP_017447361.1	transcriptional regulator SlyA	-
JK088_RS20830 (JK088_20830)	luxQ	1093113..1095689 (-)	2577	WP_005477121.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
JK088_RS20835 (JK088_20835)	luxP	1095689..1096786 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
JK088_RS20840 (JK088_20840)	-	1097138..1097458 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
JK088_RS20845 (JK088_20845)	-	1097455..1098105 (-)	651	WP_017447360.1	YceH family protein	-
JK088_RS20850 (JK088_20850)	-	1098282..1098497 (-)	216	WP_005477197.1	hypothetical protein	-
JK088_RS20855 (JK088_20855)	-	1098825..1099139 (+)	315	WP_005453573.1	DUF496 family protein	-
JK088_RS20860 (JK088_20860)	-	1099262..1100599 (+)	1338	WP_025983296.1	MATE family efflux transporter	-
JK088_RS20865 (JK088_20865)	-	1100673..1101650 (-)	978	WP_005477354.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=620879 JK088_RS20835 WP_005463467.1 1095689..1096786(-) (luxP) [Vibrio parahaemolyticus strain LH214]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=620879 JK088_RS20835 WP_005463467.1 1095689..1096786(-) (luxP) [Vibrio parahaemolyticus strain LH214]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGCCCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTTCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTAGAGTTTGGCAAGCAGTTCCCAAAAAATACCCATTACAGTGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCTGGGTATGAAGCTGCAAAAGCCAGTTTAAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGAGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644