Detailed information NTG0620806

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: LJY22_RS11515
• Genome accession: NZ_CP085843
• Coordinates: 2517376..2520762 (+)
• Length: 1128 a.a.
• NCBI ID: WP_243328177.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain NV27
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2512376..2525762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJY22_RS11495 (LJY22_11485)	erpA	2512732..2513073 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
LJY22_RS11500 (LJY22_11490)	hemL	2513320..2514615 (+)	1296	WP_203346944.1	glutamate-1-semialdehyde 2,1-aminomutase	-
LJY22_RS11505 (LJY22_11495)	-	2514962..2516047 (+)	1086	WP_048625951.1	AI-2E family transporter	-
LJY22_RS11510 (LJY22_11500)	rsmC	2516124..2517149 (+)	1026	WP_005394693.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
LJY22_RS11515 (LJY22_11505)	chiS	2517376..2520762 (+)	3387	WP_243328177.1	response regulator	Regulator
LJY22_RS11520 (LJY22_11510)	-	2521541..2523223 (+)	1683	WP_005394703.1	ABC transporter substrate-binding protein	-
LJY22_RS11525 (LJY22_11515)	-	2523393..2524379 (+)	987	WP_005394705.1	ABC transporter permease	-
LJY22_RS11530 (LJY22_11520)	-	2524382..2525407 (+)	1026	WP_005394707.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127035.63 Da
• Isoelectric Point: 5.4346

>NTDB_id=620806 LJY22_RS11515 WP_243328177.1 2517376..2520762(+) (chiS) [Vibrio diabolicus strain NV27]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENNEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=620806 LJY22_RS11515 WP_243328177.1 2517376..2520762(+) (chiS) [Vibrio diabolicus strain NV27]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACTATTACTGCGATCTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACACTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGTAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAACGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTGATTGTGTCTGATTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGTCGCAGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAACACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
ATCATCGCTGCTTATGCACCGATTGAGACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCAGAAAACGAAGCTTT
CGCTCGTATTCATCAACTCGAAAAACTATTTGTTATCGCCATGCTGATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAACTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAACGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTCGAGAGCAACATCCAGATCATTCAAAAACAAAATGATGAACTGC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTCCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACTTTAGCGTCCGGCGCTAACGGTGCTATTCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAACCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGCCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGCGGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCAGAAGGTAAAATCGTTATCTCCGCCAATGTGGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCCGCAGAACATCTTGAACATATTTTCGAGCCACTTATCCAAGCAGGACAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATTGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAACCTATGGTCGGCACCACCTTCAGTTTCACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCAGCACACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAATGAAGACTTATCACTGCCAGAGAATCCAGAC
GGCCCGTTACTGTATGTCGCTGACGATGAGCCAGTAAACCTGCGTGTGCTTGAGAGCTTCTTACGTTTAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGACCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGACCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTGCGAGGCTTTGAAGCAGGAGCCAACGATTATTTATCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCGCGCATCCAAGCGCACTTAACGGCAAGCCAAGCTGAAATGCGCCATATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTGTAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTACGTGAAGATAAACGTATCCGGTTTGCTAATGAAGCTGCCTGCAAACTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAATTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCAGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAGTTTACACGCC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACGCTGCCAAAAACGCCACGTTGGAGAACGG
TATTGAGCTCGATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCTGAGCGTGCGTACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765