Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NW957_RS09135 Genome accession   NZ_CP102977
Coordinates   1879744..1880562 (-) Length   272 a.a.
NCBI ID   WP_165469134.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 27-G-H     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1874744..1885562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW957_RS09115 (NW957_09115) - 1875837..1876814 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  NW957_RS09120 (NW957_09120) - 1877075..1877911 (-) 837 WP_000886456.1 hypothetical protein -
  NW957_RS09125 (NW957_09125) - 1877920..1879437 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  NW957_RS09130 (NW957_09130) - 1879452..1879766 (-) 315 WP_000435806.1 YfhH family protein -
  NW957_RS09135 (NW957_09135) recX 1879744..1880562 (-) 819 WP_165469134.1 recombination regulator RecX Regulator
  NW957_RS09140 (NW957_09140) sgtB 1880823..1881632 (-) 810 WP_165469135.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  NW957_RS09145 (NW957_09145) - 1881973..1882488 (-) 516 WP_000163285.1 type 1 glutamine amidotransferase domain-containing protein -
  NW957_RS09150 (NW957_09150) - 1882619..1882780 (-) 162 WP_001005407.1 SE1561 family protein -
  NW957_RS09155 (NW957_09155) yfkAB 1883004..1884155 (+) 1152 WP_001089613.1 radical SAM/CxCxxxxC motif protein YfkAB -
  NW957_RS09160 (NW957_09160) - 1884415..1884945 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32274.10 Da        Isoelectric Point: 6.3176

>NTDB_id=620803 NW957_RS09135 WP_165469134.1 1879744..1880562(-) (recX) [Staphylococcus aureus strain 27-G-H]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYNHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQEFDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=620803 NW957_RS09135 WP_165469134.1 1879744..1880562(-) (recX) [Staphylococcus aureus strain 27-G-H]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATAGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATAATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAATTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAAGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993